Cargando…
p.G12C KRAS mutation prevalence in non-small cell lung cancer: Contribution from interregional variability and population substructures among Hispanics
BACKGROUND: The KRAS exon 2 p. G12C mutation in patients with lung adenocarcinoma has been increasing in relevance due to the development and effectiveness of new treatment medications. Studies around different populations indicate that regional variability between ethnic groups and ancestries could...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Neoplasia Press
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626684/ https://www.ncbi.nlm.nih.gov/pubmed/34823093 http://dx.doi.org/10.1016/j.tranon.2021.101276 |
_version_ | 1784606703432499200 |
---|---|
author | Ruiz-Patiño, Alejandro Rodríguez, July Cardona, Andrés F. Ávila, Jenny Archila, Pilar Carranza, Hernán Vargas, Carlos Otero, Jorge Arrieta, Oscar Zatarain-Barrón, Lucia Sotelo, Carolina Ordoñez, Camila García-Robledo, Juan Esteban Rojas, Leonardo Bermúdez, Maritza Gámez, Tatiana Mayorga, Diana Corrales, Luis Martín, Claudio Recondo, Gonzalo Mas, Luis Samtani, Suraj Ricaurte, Luisa Malapelle, Umberto Russo, Alessandro Barrón, Feliciano Santoyo, Nicolas Rolfo, Christian Rosell, Rafael |
author_facet | Ruiz-Patiño, Alejandro Rodríguez, July Cardona, Andrés F. Ávila, Jenny Archila, Pilar Carranza, Hernán Vargas, Carlos Otero, Jorge Arrieta, Oscar Zatarain-Barrón, Lucia Sotelo, Carolina Ordoñez, Camila García-Robledo, Juan Esteban Rojas, Leonardo Bermúdez, Maritza Gámez, Tatiana Mayorga, Diana Corrales, Luis Martín, Claudio Recondo, Gonzalo Mas, Luis Samtani, Suraj Ricaurte, Luisa Malapelle, Umberto Russo, Alessandro Barrón, Feliciano Santoyo, Nicolas Rolfo, Christian Rosell, Rafael |
author_sort | Ruiz-Patiño, Alejandro |
collection | PubMed |
description | BACKGROUND: The KRAS exon 2 p. G12C mutation in patients with lung adenocarcinoma has been increasing in relevance due to the development and effectiveness of new treatment medications. Studies around different populations indicate that regional variability between ethnic groups and ancestries could play an essential role in developing this molecular alteration within lung cancer. METHODS: In a prospective and retrospective cohort study on samples from lung adenocarcinoma from 1000 patients from different administrative regions in Colombia were tested for the KRAS p.G12C mutation. An analysis of STR populations markers was conducted to identify substructure contributions to mutation prevalence. RESULTS: Included were 979 patients with a national mean frequency for the KRAS exon 2 p.G12C mutation of 7.97% (95%CI 6.27–9.66%). Variation between regions was also identified with Antioquia reaching a positivity value of 12.7% (95%CI 9.1–16.3%) in contrast to other regions such as Bogota DC (Capital region) with 5.4% (2.7–8.2%) and Bolivar with 2.4% (95%CI 0–7.2%) (p-value = 0.00262). Furthermore, Short tandem repeat population substructures were found for eight markers that strongly yielded association with KRAS exon 2 p.G12C frequency reaching an adjusted R2 of 0.945 and a p-value of < 0.0001. CONCLUSIONS: Widespread identification of KRAS exon 2 p.G12C mutations, especially in cases where NGS is not easily achieved is feasible at a population based level that can characterize regional and national patterns of mutation status. Furthermore, this type of mutation prevalence follows a population substructure pattern that can be easily determined by population and ancestral markers such as STR. |
format | Online Article Text |
id | pubmed-8626684 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Neoplasia Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-86266842021-12-03 p.G12C KRAS mutation prevalence in non-small cell lung cancer: Contribution from interregional variability and population substructures among Hispanics Ruiz-Patiño, Alejandro Rodríguez, July Cardona, Andrés F. Ávila, Jenny Archila, Pilar Carranza, Hernán Vargas, Carlos Otero, Jorge Arrieta, Oscar Zatarain-Barrón, Lucia Sotelo, Carolina Ordoñez, Camila García-Robledo, Juan Esteban Rojas, Leonardo Bermúdez, Maritza Gámez, Tatiana Mayorga, Diana Corrales, Luis Martín, Claudio Recondo, Gonzalo Mas, Luis Samtani, Suraj Ricaurte, Luisa Malapelle, Umberto Russo, Alessandro Barrón, Feliciano Santoyo, Nicolas Rolfo, Christian Rosell, Rafael Transl Oncol Original Research BACKGROUND: The KRAS exon 2 p. G12C mutation in patients with lung adenocarcinoma has been increasing in relevance due to the development and effectiveness of new treatment medications. Studies around different populations indicate that regional variability between ethnic groups and ancestries could play an essential role in developing this molecular alteration within lung cancer. METHODS: In a prospective and retrospective cohort study on samples from lung adenocarcinoma from 1000 patients from different administrative regions in Colombia were tested for the KRAS p.G12C mutation. An analysis of STR populations markers was conducted to identify substructure contributions to mutation prevalence. RESULTS: Included were 979 patients with a national mean frequency for the KRAS exon 2 p.G12C mutation of 7.97% (95%CI 6.27–9.66%). Variation between regions was also identified with Antioquia reaching a positivity value of 12.7% (95%CI 9.1–16.3%) in contrast to other regions such as Bogota DC (Capital region) with 5.4% (2.7–8.2%) and Bolivar with 2.4% (95%CI 0–7.2%) (p-value = 0.00262). Furthermore, Short tandem repeat population substructures were found for eight markers that strongly yielded association with KRAS exon 2 p.G12C frequency reaching an adjusted R2 of 0.945 and a p-value of < 0.0001. CONCLUSIONS: Widespread identification of KRAS exon 2 p.G12C mutations, especially in cases where NGS is not easily achieved is feasible at a population based level that can characterize regional and national patterns of mutation status. Furthermore, this type of mutation prevalence follows a population substructure pattern that can be easily determined by population and ancestral markers such as STR. Neoplasia Press 2021-11-22 /pmc/articles/PMC8626684/ /pubmed/34823093 http://dx.doi.org/10.1016/j.tranon.2021.101276 Text en © 2021 The Authors. Published by Elsevier Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Research Ruiz-Patiño, Alejandro Rodríguez, July Cardona, Andrés F. Ávila, Jenny Archila, Pilar Carranza, Hernán Vargas, Carlos Otero, Jorge Arrieta, Oscar Zatarain-Barrón, Lucia Sotelo, Carolina Ordoñez, Camila García-Robledo, Juan Esteban Rojas, Leonardo Bermúdez, Maritza Gámez, Tatiana Mayorga, Diana Corrales, Luis Martín, Claudio Recondo, Gonzalo Mas, Luis Samtani, Suraj Ricaurte, Luisa Malapelle, Umberto Russo, Alessandro Barrón, Feliciano Santoyo, Nicolas Rolfo, Christian Rosell, Rafael p.G12C KRAS mutation prevalence in non-small cell lung cancer: Contribution from interregional variability and population substructures among Hispanics |
title | p.G12C KRAS mutation prevalence in non-small cell lung cancer: Contribution from interregional variability and population substructures among Hispanics |
title_full | p.G12C KRAS mutation prevalence in non-small cell lung cancer: Contribution from interregional variability and population substructures among Hispanics |
title_fullStr | p.G12C KRAS mutation prevalence in non-small cell lung cancer: Contribution from interregional variability and population substructures among Hispanics |
title_full_unstemmed | p.G12C KRAS mutation prevalence in non-small cell lung cancer: Contribution from interregional variability and population substructures among Hispanics |
title_short | p.G12C KRAS mutation prevalence in non-small cell lung cancer: Contribution from interregional variability and population substructures among Hispanics |
title_sort | p.g12c kras mutation prevalence in non-small cell lung cancer: contribution from interregional variability and population substructures among hispanics |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626684/ https://www.ncbi.nlm.nih.gov/pubmed/34823093 http://dx.doi.org/10.1016/j.tranon.2021.101276 |
work_keys_str_mv | AT ruizpatinoalejandro pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT rodriguezjuly pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT cardonaandresf pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT avilajenny pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT archilapilar pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT carranzahernan pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT vargascarlos pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT oterojorge pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT arrietaoscar pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT zatarainbarronlucia pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT sotelocarolina pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT ordonezcamila pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT garciarobledojuanesteban pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT rojasleonardo pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT bermudezmaritza pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT gameztatiana pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT mayorgadiana pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT corralesluis pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT martinclaudio pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT recondogonzalo pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT masluis pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT samtanisuraj pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT ricaurteluisa pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT malapelleumberto pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT russoalessandro pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT barronfeliciano pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT santoyonicolas pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT rolfochristian pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT rosellrafael pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics AT pg12ckrasmutationprevalenceinnonsmallcelllungcancercontributionfrominterregionalvariabilityandpopulationsubstructuresamonghispanics |