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Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms

Long noncoding RNAs (lncRNAs) are emerging as critical regulators of gene expression and play fundamental roles in immune regulation. Growing evidence suggests that immune-related genes and lncRNAs can serve as markers to predict the prognosis of patients with cancers, including hepatocellular carci...

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Autores principales: Wang, Xiang-Xu, Wu, Li-Hong, Ai, Liping, Pan, Wei, Ren, Jing-Yi, Zhang, Qiong, Zhang, Hong-Mei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society of Gene & Cell Therapy 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626812/
https://www.ncbi.nlm.nih.gov/pubmed/34900397
http://dx.doi.org/10.1016/j.omtn.2021.11.006
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author Wang, Xiang-Xu
Wu, Li-Hong
Ai, Liping
Pan, Wei
Ren, Jing-Yi
Zhang, Qiong
Zhang, Hong-Mei
author_facet Wang, Xiang-Xu
Wu, Li-Hong
Ai, Liping
Pan, Wei
Ren, Jing-Yi
Zhang, Qiong
Zhang, Hong-Mei
author_sort Wang, Xiang-Xu
collection PubMed
description Long noncoding RNAs (lncRNAs) are emerging as critical regulators of gene expression and play fundamental roles in immune regulation. Growing evidence suggests that immune-related genes and lncRNAs can serve as markers to predict the prognosis of patients with cancers, including hepatocellular carcinoma (HCC). This study aimed to contract an immune-related lncRNA (IR-lncRNA) signature for prospective assessment to predict early recurrence of HCC. A total of 319 HCC samples under radical resection were randomly divided into a training cohort (161 samples) and a testing cohort (158 samples). In the training dataset, univariate, lasso, and multivariate Cox regression analyses identified a 9-IR-lncRNA signature closely related to disease-free survival. Kaplan-Meier analysis, principal component analysis, gene set enrichment analysis, and nomogram were used to evaluate the risk model. The results were further confirmed in the testing cohort. Furthermore, we constructed a competitive endogenous RNA regulatory network. The results of the present study indicated that this 9-IR-lncRNA signature has important clinical implications for improving predictive outcomes and guiding individualized treatment in HCC patients. These IR-lncRNAs and regulated genes may be potential biomarkers associated with the prognosis of HCC.
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spelling pubmed-86268122021-12-09 Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms Wang, Xiang-Xu Wu, Li-Hong Ai, Liping Pan, Wei Ren, Jing-Yi Zhang, Qiong Zhang, Hong-Mei Mol Ther Nucleic Acids Original Article Long noncoding RNAs (lncRNAs) are emerging as critical regulators of gene expression and play fundamental roles in immune regulation. Growing evidence suggests that immune-related genes and lncRNAs can serve as markers to predict the prognosis of patients with cancers, including hepatocellular carcinoma (HCC). This study aimed to contract an immune-related lncRNA (IR-lncRNA) signature for prospective assessment to predict early recurrence of HCC. A total of 319 HCC samples under radical resection were randomly divided into a training cohort (161 samples) and a testing cohort (158 samples). In the training dataset, univariate, lasso, and multivariate Cox regression analyses identified a 9-IR-lncRNA signature closely related to disease-free survival. Kaplan-Meier analysis, principal component analysis, gene set enrichment analysis, and nomogram were used to evaluate the risk model. The results were further confirmed in the testing cohort. Furthermore, we constructed a competitive endogenous RNA regulatory network. The results of the present study indicated that this 9-IR-lncRNA signature has important clinical implications for improving predictive outcomes and guiding individualized treatment in HCC patients. These IR-lncRNAs and regulated genes may be potential biomarkers associated with the prognosis of HCC. American Society of Gene & Cell Therapy 2021-11-10 /pmc/articles/PMC8626812/ /pubmed/34900397 http://dx.doi.org/10.1016/j.omtn.2021.11.006 Text en © 2021 Department of Clinical Oncology, Xijing Hospital, Fourth Military Medical University https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Wang, Xiang-Xu
Wu, Li-Hong
Ai, Liping
Pan, Wei
Ren, Jing-Yi
Zhang, Qiong
Zhang, Hong-Mei
Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms
title Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms
title_full Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms
title_fullStr Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms
title_full_unstemmed Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms
title_short Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms
title_sort construction of an hcc recurrence model basedon the investigation of immune-relatedlncrnas and related mechanisms
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626812/
https://www.ncbi.nlm.nih.gov/pubmed/34900397
http://dx.doi.org/10.1016/j.omtn.2021.11.006
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