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Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms
Long noncoding RNAs (lncRNAs) are emerging as critical regulators of gene expression and play fundamental roles in immune regulation. Growing evidence suggests that immune-related genes and lncRNAs can serve as markers to predict the prognosis of patients with cancers, including hepatocellular carci...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society of Gene & Cell Therapy
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626812/ https://www.ncbi.nlm.nih.gov/pubmed/34900397 http://dx.doi.org/10.1016/j.omtn.2021.11.006 |
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author | Wang, Xiang-Xu Wu, Li-Hong Ai, Liping Pan, Wei Ren, Jing-Yi Zhang, Qiong Zhang, Hong-Mei |
author_facet | Wang, Xiang-Xu Wu, Li-Hong Ai, Liping Pan, Wei Ren, Jing-Yi Zhang, Qiong Zhang, Hong-Mei |
author_sort | Wang, Xiang-Xu |
collection | PubMed |
description | Long noncoding RNAs (lncRNAs) are emerging as critical regulators of gene expression and play fundamental roles in immune regulation. Growing evidence suggests that immune-related genes and lncRNAs can serve as markers to predict the prognosis of patients with cancers, including hepatocellular carcinoma (HCC). This study aimed to contract an immune-related lncRNA (IR-lncRNA) signature for prospective assessment to predict early recurrence of HCC. A total of 319 HCC samples under radical resection were randomly divided into a training cohort (161 samples) and a testing cohort (158 samples). In the training dataset, univariate, lasso, and multivariate Cox regression analyses identified a 9-IR-lncRNA signature closely related to disease-free survival. Kaplan-Meier analysis, principal component analysis, gene set enrichment analysis, and nomogram were used to evaluate the risk model. The results were further confirmed in the testing cohort. Furthermore, we constructed a competitive endogenous RNA regulatory network. The results of the present study indicated that this 9-IR-lncRNA signature has important clinical implications for improving predictive outcomes and guiding individualized treatment in HCC patients. These IR-lncRNAs and regulated genes may be potential biomarkers associated with the prognosis of HCC. |
format | Online Article Text |
id | pubmed-8626812 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Society of Gene & Cell Therapy |
record_format | MEDLINE/PubMed |
spelling | pubmed-86268122021-12-09 Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms Wang, Xiang-Xu Wu, Li-Hong Ai, Liping Pan, Wei Ren, Jing-Yi Zhang, Qiong Zhang, Hong-Mei Mol Ther Nucleic Acids Original Article Long noncoding RNAs (lncRNAs) are emerging as critical regulators of gene expression and play fundamental roles in immune regulation. Growing evidence suggests that immune-related genes and lncRNAs can serve as markers to predict the prognosis of patients with cancers, including hepatocellular carcinoma (HCC). This study aimed to contract an immune-related lncRNA (IR-lncRNA) signature for prospective assessment to predict early recurrence of HCC. A total of 319 HCC samples under radical resection were randomly divided into a training cohort (161 samples) and a testing cohort (158 samples). In the training dataset, univariate, lasso, and multivariate Cox regression analyses identified a 9-IR-lncRNA signature closely related to disease-free survival. Kaplan-Meier analysis, principal component analysis, gene set enrichment analysis, and nomogram were used to evaluate the risk model. The results were further confirmed in the testing cohort. Furthermore, we constructed a competitive endogenous RNA regulatory network. The results of the present study indicated that this 9-IR-lncRNA signature has important clinical implications for improving predictive outcomes and guiding individualized treatment in HCC patients. These IR-lncRNAs and regulated genes may be potential biomarkers associated with the prognosis of HCC. American Society of Gene & Cell Therapy 2021-11-10 /pmc/articles/PMC8626812/ /pubmed/34900397 http://dx.doi.org/10.1016/j.omtn.2021.11.006 Text en © 2021 Department of Clinical Oncology, Xijing Hospital, Fourth Military Medical University https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Article Wang, Xiang-Xu Wu, Li-Hong Ai, Liping Pan, Wei Ren, Jing-Yi Zhang, Qiong Zhang, Hong-Mei Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms |
title | Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms |
title_full | Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms |
title_fullStr | Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms |
title_full_unstemmed | Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms |
title_short | Construction of an HCC recurrence model basedon the investigation of immune-relatedlncRNAs and related mechanisms |
title_sort | construction of an hcc recurrence model basedon the investigation of immune-relatedlncrnas and related mechanisms |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626812/ https://www.ncbi.nlm.nih.gov/pubmed/34900397 http://dx.doi.org/10.1016/j.omtn.2021.11.006 |
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