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Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages
Messastrum gracile SE-MC4 is a non-model microalga exhibiting superior oil-accumulating abilities. However, biomass production in M. gracile SE-MC4 is limited due to low cell proliferation especially after prolonged cultivation under oil-inducing culture conditions. Present data consist of next gene...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626828/ https://www.ncbi.nlm.nih.gov/pubmed/34869809 http://dx.doi.org/10.1016/j.dib.2021.107607 |
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author | Afifudeen, C. L. Wan Loh, Saw Hong Wong, Li Lian Aziz, Ahmad Takahashi, Kazutaka Wahid, Mohd Effendy Abd Cha, Thye San |
author_facet | Afifudeen, C. L. Wan Loh, Saw Hong Wong, Li Lian Aziz, Ahmad Takahashi, Kazutaka Wahid, Mohd Effendy Abd Cha, Thye San |
author_sort | Afifudeen, C. L. Wan |
collection | PubMed |
description | Messastrum gracile SE-MC4 is a non-model microalga exhibiting superior oil-accumulating abilities. However, biomass production in M. gracile SE-MC4 is limited due to low cell proliferation especially after prolonged cultivation under oil-inducing culture conditions. Present data consist of next generation RNA sequencing data of M. gracile SE-MC4 under exponential and stationary growth stages. RNA of six samples were extracted and sequenced with insert size of 100 bp paired-end strategy using BGISEQ-500 platform to produce a total of 59.64 Gb data with 314 million reads. Sequences were filtered and de novo assembled to form 53,307 number of gene sequences. Sequencing data were deposited in National Center for Biotechnology Information (NCBI) and can be accessed via BioProject ID PRJNA552165. This information can be used to enhance biomass production in M. gracile SE-MC4 and other microalgae aimed towards improving biodiesel development. |
format | Online Article Text |
id | pubmed-8626828 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-86268282021-12-02 Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages Afifudeen, C. L. Wan Loh, Saw Hong Wong, Li Lian Aziz, Ahmad Takahashi, Kazutaka Wahid, Mohd Effendy Abd Cha, Thye San Data Brief Data Article Messastrum gracile SE-MC4 is a non-model microalga exhibiting superior oil-accumulating abilities. However, biomass production in M. gracile SE-MC4 is limited due to low cell proliferation especially after prolonged cultivation under oil-inducing culture conditions. Present data consist of next generation RNA sequencing data of M. gracile SE-MC4 under exponential and stationary growth stages. RNA of six samples were extracted and sequenced with insert size of 100 bp paired-end strategy using BGISEQ-500 platform to produce a total of 59.64 Gb data with 314 million reads. Sequences were filtered and de novo assembled to form 53,307 number of gene sequences. Sequencing data were deposited in National Center for Biotechnology Information (NCBI) and can be accessed via BioProject ID PRJNA552165. This information can be used to enhance biomass production in M. gracile SE-MC4 and other microalgae aimed towards improving biodiesel development. Elsevier 2021-11-19 /pmc/articles/PMC8626828/ /pubmed/34869809 http://dx.doi.org/10.1016/j.dib.2021.107607 Text en © 2021 The Authors. Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Afifudeen, C. L. Wan Loh, Saw Hong Wong, Li Lian Aziz, Ahmad Takahashi, Kazutaka Wahid, Mohd Effendy Abd Cha, Thye San Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages |
title | Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages |
title_full | Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages |
title_fullStr | Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages |
title_full_unstemmed | Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages |
title_short | Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages |
title_sort | transcriptomics de novo sequencing data of messastrum gracile se-mc4 under exponential and stationary growth stages |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626828/ https://www.ncbi.nlm.nih.gov/pubmed/34869809 http://dx.doi.org/10.1016/j.dib.2021.107607 |
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