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Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages

Messastrum gracile SE-MC4 is a non-model microalga exhibiting superior oil-accumulating abilities. However, biomass production in M. gracile SE-MC4 is limited due to low cell proliferation especially after prolonged cultivation under oil-inducing culture conditions. Present data consist of next gene...

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Autores principales: Afifudeen, C. L. Wan, Loh, Saw Hong, Wong, Li Lian, Aziz, Ahmad, Takahashi, Kazutaka, Wahid, Mohd Effendy Abd, Cha, Thye San
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626828/
https://www.ncbi.nlm.nih.gov/pubmed/34869809
http://dx.doi.org/10.1016/j.dib.2021.107607
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author Afifudeen, C. L. Wan
Loh, Saw Hong
Wong, Li Lian
Aziz, Ahmad
Takahashi, Kazutaka
Wahid, Mohd Effendy Abd
Cha, Thye San
author_facet Afifudeen, C. L. Wan
Loh, Saw Hong
Wong, Li Lian
Aziz, Ahmad
Takahashi, Kazutaka
Wahid, Mohd Effendy Abd
Cha, Thye San
author_sort Afifudeen, C. L. Wan
collection PubMed
description Messastrum gracile SE-MC4 is a non-model microalga exhibiting superior oil-accumulating abilities. However, biomass production in M. gracile SE-MC4 is limited due to low cell proliferation especially after prolonged cultivation under oil-inducing culture conditions. Present data consist of next generation RNA sequencing data of M. gracile SE-MC4 under exponential and stationary growth stages. RNA of six samples were extracted and sequenced with insert size of 100 bp paired-end strategy using BGISEQ-500 platform to produce a total of 59.64 Gb data with 314 million reads. Sequences were filtered and de novo assembled to form 53,307 number of gene sequences. Sequencing data were deposited in National Center for Biotechnology Information (NCBI) and can be accessed via BioProject ID PRJNA552165. This information can be used to enhance biomass production in M. gracile SE-MC4 and other microalgae aimed towards improving biodiesel development.
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spelling pubmed-86268282021-12-02 Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages Afifudeen, C. L. Wan Loh, Saw Hong Wong, Li Lian Aziz, Ahmad Takahashi, Kazutaka Wahid, Mohd Effendy Abd Cha, Thye San Data Brief Data Article Messastrum gracile SE-MC4 is a non-model microalga exhibiting superior oil-accumulating abilities. However, biomass production in M. gracile SE-MC4 is limited due to low cell proliferation especially after prolonged cultivation under oil-inducing culture conditions. Present data consist of next generation RNA sequencing data of M. gracile SE-MC4 under exponential and stationary growth stages. RNA of six samples were extracted and sequenced with insert size of 100 bp paired-end strategy using BGISEQ-500 platform to produce a total of 59.64 Gb data with 314 million reads. Sequences were filtered and de novo assembled to form 53,307 number of gene sequences. Sequencing data were deposited in National Center for Biotechnology Information (NCBI) and can be accessed via BioProject ID PRJNA552165. This information can be used to enhance biomass production in M. gracile SE-MC4 and other microalgae aimed towards improving biodiesel development. Elsevier 2021-11-19 /pmc/articles/PMC8626828/ /pubmed/34869809 http://dx.doi.org/10.1016/j.dib.2021.107607 Text en © 2021 The Authors. Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Afifudeen, C. L. Wan
Loh, Saw Hong
Wong, Li Lian
Aziz, Ahmad
Takahashi, Kazutaka
Wahid, Mohd Effendy Abd
Cha, Thye San
Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages
title Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages
title_full Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages
title_fullStr Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages
title_full_unstemmed Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages
title_short Transcriptomics de novo sequencing data of Messastrum gracile SE-MC4 under exponential and stationary growth stages
title_sort transcriptomics de novo sequencing data of messastrum gracile se-mc4 under exponential and stationary growth stages
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626828/
https://www.ncbi.nlm.nih.gov/pubmed/34869809
http://dx.doi.org/10.1016/j.dib.2021.107607
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