Cargando…

LncRNA ADAMTS9-AS2 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Lung Adenocarcinoma

BACKGROUND: The role of long noncoding RNA (LncRNA) ADAMTS9 antisense RNA 2 (ADAMTS9-AS2) is unclear in lung adenocarcinoma (LUAD). The aim of this study was to explore the relationship between ADAMTS9-AS2 and LUAD, based on The Cancer Genome Atlas (TCGA) database and bioinformatics analysis. METHOD...

Descripción completa

Detalles Bibliográficos
Autores principales: Lin, Zhichao, Huang, Wenhai, Yi, Yongsheng, Li, Dongbing, Xie, Zehua, Li, Zumei, Ye, Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626860/
https://www.ncbi.nlm.nih.gov/pubmed/34849000
http://dx.doi.org/10.2147/IJGM.S340683
_version_ 1784606740503855104
author Lin, Zhichao
Huang, Wenhai
Yi, Yongsheng
Li, Dongbing
Xie, Zehua
Li, Zumei
Ye, Min
author_facet Lin, Zhichao
Huang, Wenhai
Yi, Yongsheng
Li, Dongbing
Xie, Zehua
Li, Zumei
Ye, Min
author_sort Lin, Zhichao
collection PubMed
description BACKGROUND: The role of long noncoding RNA (LncRNA) ADAMTS9 antisense RNA 2 (ADAMTS9-AS2) is unclear in lung adenocarcinoma (LUAD). The aim of this study was to explore the relationship between ADAMTS9-AS2 and LUAD, based on The Cancer Genome Atlas (TCGA) database and bioinformatics analysis. METHODS: Various statistical methods, Kaplan–Meier method, Cox regression analysis, GSEA, and immune infiltration analysis were used to evaluate the relationship between clinical features and ADAMTS9-AS2 expression, prognostic factors, and the significant involvement of ADAMTS9-AS2 in function. RESULTS: In LUAD patients, low expression of ADAMTS9-AS2 was associated with N stage (P=0.011), gender (P=0.002), number of packs smoked (P=0.024) and smoker (P<0.001). Low ADAMTS9-AS2 expression predicted a poorer overall survival (OS) (HR: 0.68; 95% CI: 0.51–0.91; P=0.01). And ADAMTS9-AS2 expression (HR: 0.626; 95% CI: 0.397–0.986; P=0.043) was independently correlated with OS in LUAD patients. Unwinding of DNA, extrinsic pathway, polo-like kinase-mediated events, cori cycle, MCM pathway, proteasome pathway, lagging strand synthesis and PCNA-dependent long patch base excision repair were differentially enriched in ADAMTS9-AS2 high expression phenotype. ADAMTS9-AS2 expression was correlated with certain immune infiltrating cells. CONCLUSION: In LUAD patients, ADAMTS9-AS2 expression was significantly associated with poor survival and immune infiltration. ADAMTS9-AS2 may be a promising biomarker of prognosis and response to immunotherapy for LUAD.
format Online
Article
Text
id pubmed-8626860
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Dove
record_format MEDLINE/PubMed
spelling pubmed-86268602021-11-29 LncRNA ADAMTS9-AS2 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Lung Adenocarcinoma Lin, Zhichao Huang, Wenhai Yi, Yongsheng Li, Dongbing Xie, Zehua Li, Zumei Ye, Min Int J Gen Med Original Research BACKGROUND: The role of long noncoding RNA (LncRNA) ADAMTS9 antisense RNA 2 (ADAMTS9-AS2) is unclear in lung adenocarcinoma (LUAD). The aim of this study was to explore the relationship between ADAMTS9-AS2 and LUAD, based on The Cancer Genome Atlas (TCGA) database and bioinformatics analysis. METHODS: Various statistical methods, Kaplan–Meier method, Cox regression analysis, GSEA, and immune infiltration analysis were used to evaluate the relationship between clinical features and ADAMTS9-AS2 expression, prognostic factors, and the significant involvement of ADAMTS9-AS2 in function. RESULTS: In LUAD patients, low expression of ADAMTS9-AS2 was associated with N stage (P=0.011), gender (P=0.002), number of packs smoked (P=0.024) and smoker (P<0.001). Low ADAMTS9-AS2 expression predicted a poorer overall survival (OS) (HR: 0.68; 95% CI: 0.51–0.91; P=0.01). And ADAMTS9-AS2 expression (HR: 0.626; 95% CI: 0.397–0.986; P=0.043) was independently correlated with OS in LUAD patients. Unwinding of DNA, extrinsic pathway, polo-like kinase-mediated events, cori cycle, MCM pathway, proteasome pathway, lagging strand synthesis and PCNA-dependent long patch base excision repair were differentially enriched in ADAMTS9-AS2 high expression phenotype. ADAMTS9-AS2 expression was correlated with certain immune infiltrating cells. CONCLUSION: In LUAD patients, ADAMTS9-AS2 expression was significantly associated with poor survival and immune infiltration. ADAMTS9-AS2 may be a promising biomarker of prognosis and response to immunotherapy for LUAD. Dove 2021-11-20 /pmc/articles/PMC8626860/ /pubmed/34849000 http://dx.doi.org/10.2147/IJGM.S340683 Text en © 2021 Lin et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Lin, Zhichao
Huang, Wenhai
Yi, Yongsheng
Li, Dongbing
Xie, Zehua
Li, Zumei
Ye, Min
LncRNA ADAMTS9-AS2 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Lung Adenocarcinoma
title LncRNA ADAMTS9-AS2 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Lung Adenocarcinoma
title_full LncRNA ADAMTS9-AS2 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Lung Adenocarcinoma
title_fullStr LncRNA ADAMTS9-AS2 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Lung Adenocarcinoma
title_full_unstemmed LncRNA ADAMTS9-AS2 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Lung Adenocarcinoma
title_short LncRNA ADAMTS9-AS2 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Lung Adenocarcinoma
title_sort lncrna adamts9-as2 is a prognostic biomarker and correlated with immune infiltrates in lung adenocarcinoma
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626860/
https://www.ncbi.nlm.nih.gov/pubmed/34849000
http://dx.doi.org/10.2147/IJGM.S340683
work_keys_str_mv AT linzhichao lncrnaadamts9as2isaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesinlungadenocarcinoma
AT huangwenhai lncrnaadamts9as2isaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesinlungadenocarcinoma
AT yiyongsheng lncrnaadamts9as2isaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesinlungadenocarcinoma
AT lidongbing lncrnaadamts9as2isaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesinlungadenocarcinoma
AT xiezehua lncrnaadamts9as2isaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesinlungadenocarcinoma
AT lizumei lncrnaadamts9as2isaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesinlungadenocarcinoma
AT yemin lncrnaadamts9as2isaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesinlungadenocarcinoma