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Development of a dynamic interactive web tool to enhance understanding of multi-state model analyses: MSMplus

BACKGROUND: Multi-state models are used in complex disease pathways to describe a process where an individual moves from one state to the next, taking into account competing states during each transition. In a multi-state setting, there are various measures to be estimated that are of great epidemio...

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Autores principales: Skourlis, Nikolaos, Crowther, Michael J., Andersson, Therese M-L., Lambert, Paul C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8627614/
https://www.ncbi.nlm.nih.gov/pubmed/34837946
http://dx.doi.org/10.1186/s12874-021-01420-9
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author Skourlis, Nikolaos
Crowther, Michael J.
Andersson, Therese M-L.
Lambert, Paul C.
author_facet Skourlis, Nikolaos
Crowther, Michael J.
Andersson, Therese M-L.
Lambert, Paul C.
author_sort Skourlis, Nikolaos
collection PubMed
description BACKGROUND: Multi-state models are used in complex disease pathways to describe a process where an individual moves from one state to the next, taking into account competing states during each transition. In a multi-state setting, there are various measures to be estimated that are of great epidemiological importance. However, increased complexity of the multi-state setting and predictions over time for individuals with different covariate patterns may lead to increased difficulty in communicating the estimated measures. The need for easy and meaningful communication of the analysis results motivated the development of a web tool to address these issues. RESULTS: MSMplus is a publicly available web tool, developed via the Shiny R package, with the aim of enhancing the understanding of multi-state model analyses results. The results from any multi-state model analysis are uploaded to the application in a pre-specified format. Through a variety of user-tailored interactive graphs, the application contributes to an improvement in communication, reporting and interpretation of multi-state analysis results as well as comparison between different approaches. The predicted measures that can be supported by MSMplus include, among others, the transition probabilities, the transition intensity rates, the length of stay in each state, the probability of ever visiting a state and user defined measures. Representation of differences, ratios and confidence intervals of the aforementioned measures are also supported. MSMplus is a useful tool that enhances communication and understanding of multi-state model analyses results. CONCLUSIONS: Further use and development of web tools should be encouraged in the future as a means to communicate scientific research. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at (10.1186/s12874-021-01420-9).
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spelling pubmed-86276142021-11-30 Development of a dynamic interactive web tool to enhance understanding of multi-state model analyses: MSMplus Skourlis, Nikolaos Crowther, Michael J. Andersson, Therese M-L. Lambert, Paul C. BMC Med Res Methodol Software BACKGROUND: Multi-state models are used in complex disease pathways to describe a process where an individual moves from one state to the next, taking into account competing states during each transition. In a multi-state setting, there are various measures to be estimated that are of great epidemiological importance. However, increased complexity of the multi-state setting and predictions over time for individuals with different covariate patterns may lead to increased difficulty in communicating the estimated measures. The need for easy and meaningful communication of the analysis results motivated the development of a web tool to address these issues. RESULTS: MSMplus is a publicly available web tool, developed via the Shiny R package, with the aim of enhancing the understanding of multi-state model analyses results. The results from any multi-state model analysis are uploaded to the application in a pre-specified format. Through a variety of user-tailored interactive graphs, the application contributes to an improvement in communication, reporting and interpretation of multi-state analysis results as well as comparison between different approaches. The predicted measures that can be supported by MSMplus include, among others, the transition probabilities, the transition intensity rates, the length of stay in each state, the probability of ever visiting a state and user defined measures. Representation of differences, ratios and confidence intervals of the aforementioned measures are also supported. MSMplus is a useful tool that enhances communication and understanding of multi-state model analyses results. CONCLUSIONS: Further use and development of web tools should be encouraged in the future as a means to communicate scientific research. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at (10.1186/s12874-021-01420-9). BioMed Central 2021-11-27 /pmc/articles/PMC8627614/ /pubmed/34837946 http://dx.doi.org/10.1186/s12874-021-01420-9 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Software
Skourlis, Nikolaos
Crowther, Michael J.
Andersson, Therese M-L.
Lambert, Paul C.
Development of a dynamic interactive web tool to enhance understanding of multi-state model analyses: MSMplus
title Development of a dynamic interactive web tool to enhance understanding of multi-state model analyses: MSMplus
title_full Development of a dynamic interactive web tool to enhance understanding of multi-state model analyses: MSMplus
title_fullStr Development of a dynamic interactive web tool to enhance understanding of multi-state model analyses: MSMplus
title_full_unstemmed Development of a dynamic interactive web tool to enhance understanding of multi-state model analyses: MSMplus
title_short Development of a dynamic interactive web tool to enhance understanding of multi-state model analyses: MSMplus
title_sort development of a dynamic interactive web tool to enhance understanding of multi-state model analyses: msmplus
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8627614/
https://www.ncbi.nlm.nih.gov/pubmed/34837946
http://dx.doi.org/10.1186/s12874-021-01420-9
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