Cargando…
recount3: summaries and queries for large-scale RNA-seq expression and splicing
We present recount3, a resource consisting of over 750,000 publicly available human and mouse RNA sequencing (RNA-seq) samples uniformly processed by our new Monorail analysis pipeline. To facilitate access to the data, we provide the recount3 and snapcount R/Bioconductor packages as well as complem...
Autores principales: | Wilks, Christopher, Zheng, Shijie C., Chen, Feng Yong, Charles, Rone, Solomon, Brad, Ling, Jonathan P., Imada, Eddie Luidy, Zhang, David, Joseph, Lance, Leek, Jeffrey T., Jaffe, Andrew E., Nellore, Abhinav, Collado-Torres, Leonardo, Hansen, Kasper D., Langmead, Ben |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8628444/ https://www.ncbi.nlm.nih.gov/pubmed/34844637 http://dx.doi.org/10.1186/s13059-021-02533-6 |
Ejemplares similares
-
ReCount: A multi-experiment resource of analysis-ready RNA-seq gene count datasets
por: Frazee, Alyssa C, et al.
Publicado: (2011) -
recount workflow: Accessing over 70,000 human RNA-seq samples with Bioconductor
por: Collado-Torres, Leonardo, et al.
Publicado: (2017) -
Recounting the FANTOM CAGE-Associated Transcriptome
por: Imada, Eddie Luidy, et al.
Publicado: (2020) -
Snaptron: querying splicing patterns across tens of thousands of RNA-seq samples
por: Wilks, Christopher, et al.
Publicado: (2018) -
Flexible expressed region analysis for RNA-seq with derfinder
por: Collado-Torres, Leonardo, et al.
Publicado: (2017)