Cargando…

The genome variation and developmental transcriptome maps reveal genetic differentiation of skeletal muscle in pigs

Natural and artificial directional selections have resulted in significantly genetic and phenotypic differences across breeds in domestic animals. However, the molecular regulation of skeletal muscle diversity remains largely unknown. Here, we conducted transcriptome profiling of skeletal muscle acr...

Descripción completa

Detalles Bibliográficos
Autores principales:	Yang, Yalan, Yan, Junyu, Fan, Xinhao, Chen, Jiaxing, Wang, Zishuai, Liu, Xiaoqin, Yi, Guoqiang, Liu, Yuwen, Niu, Yongchao, Zhang, Longchao, Wang, Lixian, Li, ShuaiCheng, Li, Kui, Tang, Zhonglin
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2021
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8629385/ https://www.ncbi.nlm.nih.gov/pubmed/34780471 http://dx.doi.org/10.1371/journal.pgen.1009910

Ejemplares similares

Identifying suitable reference genes for gene expression analysis in developing skeletal muscle in pigs
por: Niu, Guanglin, et al.
Publicado: (2016)

Developmental atlas of the RNA editome in Sus scrofa skeletal muscle
por: Yang, Yalan, et al.
Publicado: (2019)

Integrated analysis of miRNA and mRNA paired expression profiling of prenatal skeletal muscle development in three genotype pigs
por: Tang, Zhonglin, et al.
Publicado: (2015)

MicroRNA-21 Regulates PI3K/Akt/mTOR Signaling by Targeting TGFβI during Skeletal Muscle Development in Pigs
por: Bai, Lijing, et al.
Publicado: (2015)

Single-cell analysis reveals the lncRNA-MEG3/miRNA-133a-3p/PRRT2 axis regulates skeletal muscle regeneration and myogenesis
por: Yao, Yilong, et al.
Publicado: (2022)

Landscape of tissue-specific RNA Editome provides insight into co-regulated and altered gene expression in pigs (Sus-scrofa)
por: Adetula, Adeyinka A., et al.
Publicado: (2021)

Discovery of MicroRNAs Associated with Myogenesis by Deep Sequencing of Serial Developmental Skeletal Muscles in Pigs
por: Hou, Xinhua, et al.
Publicado: (2012)

Comparative analysis of DNA methylome and transcriptome of skeletal muscle in lean-, obese-, and mini-type pigs
por: Yang, Yalan, et al.
Publicado: (2017)

circRNAome profiling reveals circFgfr2 regulates myogenesis and muscle regeneration via a feedback loop
por: Yan, Junyu, et al.
Publicado: (2021)

Transcriptome analysis revealed chimeric RNAs, single nucleotide polymorphisms and allele-specific expression in porcine prenatal skeletal muscle
por: Yang, Yalan, et al.
Publicado: (2016)

A comprehensive epigenome atlas reveals DNA methylation regulating skeletal muscle development
por: Yang, Yalan, et al.
Publicado: (2021)

MiR-743a-5p regulates differentiation of myoblast by targeting Mob1b in skeletal muscle development and regeneration
por: Zhang, YongSheng, et al.
Publicado: (2020)

Integration of multi-omics data reveals cis-regulatory variants that are associated with phenotypic differentiation of eastern from western pigs
por: Liu, Yuwen, et al.
Publicado: (2022)

Identification of circRNAs Associated with Adipogenesis Based on RNA-Seq Data in Pigs
por: Li, Qiaowei, et al.
Publicado: (2022)

Wnt antagonist, secreted frizzled-related protein 1, is involved in prenatal skeletal muscle development and is a target of miRNA-1/206 in pigs
por: Yang, Yalan, et al.
Publicado: (2015)

Genome-wide profiling of Sus scrofa circular RNAs across nine organs and three developmental stages
por: Liang, Guoming, et al.
Publicado: (2017)

Expression and Genetic Effects of GLI Pathogenesis-Related 1 Gene on Backfat Thickness in Pigs
por: Liu, Xin, et al.
Publicado: (2022)

The landscape of chromatin accessibility in skeletal muscle during embryonic development in pigs
por: Yue, Jingwei, et al.
Publicado: (2021)

Comprehensive analysis of long non-coding RNAs highlights their spatio-temporal expression patterns and evolutional conservation in Sus scrofa
por: Tang, Zhonglin, et al.
Publicado: (2017)

Genome-Wide Expression Profiling of mRNAs, lncRNAs and circRNAs in Skeletal Muscle of Two Different Pig Breeds
por: Hou, Xinhua, et al.
Publicado: (2021)

Sp1-Mediated circRNA circHipk2 Regulates Myogenesis by Targeting Ribosomal Protein Rpl7
por: Yan, Junyu, et al.
Publicado: (2021)

MicroRNA-200c-5p Regulates Migration and Differentiation of Myoblasts via Targeting Adamts5 in Skeletal Muscle Regeneration and Myogenesis
por: Liu, Yanwen, et al.
Publicado: (2023)

SpliceFinder: ab initio prediction of splice sites using convolutional neural network
por: Wang, Ruohan, et al.
Publicado: (2019)

Genome-wide analysis of DNA methylation in obese, lean, and miniature pig breeds
por: Yang, Yalan, et al.
Publicado: (2016)

LongSAGE analysis of skeletal muscle at three prenatal stages in Tongcheng and Landrace pigs
por: Tang, Zhonglin, et al.
Publicado: (2007)

Genome-Wide Identification of RNA Editing Sites Affecting Intramuscular Fat in Pigs
por: Wang, Ligang, et al.
Publicado: (2020)

Integrated Analysis of Long Non-Coding RNA and mRNA to Reveal Putative Candidate Genes Associated with Backfat Quality in Beijing Black Pig
por: Liu, Xin, et al.
Publicado: (2022)

Genome-Wide Investigation and Functional Analysis of Sus scrofa RNA Editing Sites across Eleven Tissues
por: Wang, Zishuai, et al.
Publicado: (2019)

Genome-Wide Investigation and Functional Analysis of Sus scrofa RNA Editing Sites across Eleven Tissues
por: Wang, Zishuai, et al.
Publicado: (2019)

Associations of genome-wide structural variations with phenotypic differences in cross-bred Eurasian pigs
por: Zong, Wencheng, et al.
Publicado: (2023)

The Landscape of Accessible Chromatin and Developmental Transcriptome Maps Reveal a Genetic Mechanism of Skeletal Muscle Development in Pigs
por: Feng, Lingli, et al.
Publicado: (2023)

SCDevDB: A Database for Insights Into Single-Cell Gene Expression Profiles During Human Developmental Processes
por: Wang, Zishuai, et al.
Publicado: (2019)

Integrated Proteotranscriptomics Reveals Differences in Molecular Immunity between Min and Large White Pig Breeds
por: Yang, Liyu, et al.
Publicado: (2022)

Corrigendum: SCDevDB: A Database for Insights Into Single-Cell Gene Expression Profiles During Human Developmental Processes
por: Wang, Zishuai, et al.
Publicado: (2019)

Identification of SNPs and Candidate Genes for Milk Production Ability in Yorkshire Pigs
por: Shi, Lijun, et al.
Publicado: (2021)

Integrating Genome-Wide Association Study with RNA-Sequencing Reveals HDAC9 as a Candidate Gene Influencing Loin Muscle Area in Beijing Black Pigs
por: Hou, Renda, et al.
Publicado: (2022)

Optimizing the Construction and Update Strategies for the Genomic Selection of Pig Reference and Candidate Populations in China
por: Wei, Xia, et al.
Publicado: (2022)

Metabolite and Proteomic Profiling of Serum Reveals the Differences in Molecular Immunity between Min and Large White Pig Breeds
por: Yang, Liyu, et al.
Publicado: (2023)

Integrative Analysis of Nanopore and Illumina Sequencing Reveals Alternative Splicing Complexity in Pig Longissimus Dorsi Muscle
por: Shu, Ze, et al.
Publicado: (2022)

Comprehensive Profiles of mRNAs and miRNAs Reveal Molecular Characteristics of Multiple Organ Physiologies and Development in Pigs
por: Chen, Muya, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_7te1v4ugrfkl74d3ae2f670bv3