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Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics

BACKGROUND: MutS homolog 2 (MSH2), with the function of identifying mismatches and participating in DNA repair, is the “housekeeping gene” in the mismatch repair (MMR) system. MSH2 deficiency has been reported to enhance cancer susceptibility for the association of hereditary nonpolyposis colorectal...

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Autores principales: Qiu, Wenli, Ding, Ke, Liao, Lusheng, Ling, Yongchang, Luo, Xiaoqiong, Wang, Junli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8632401/
https://www.ncbi.nlm.nih.gov/pubmed/34859104
http://dx.doi.org/10.1155/2021/9485273
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author Qiu, Wenli
Ding, Ke
Liao, Lusheng
Ling, Yongchang
Luo, Xiaoqiong
Wang, Junli
author_facet Qiu, Wenli
Ding, Ke
Liao, Lusheng
Ling, Yongchang
Luo, Xiaoqiong
Wang, Junli
author_sort Qiu, Wenli
collection PubMed
description BACKGROUND: MutS homolog 2 (MSH2), with the function of identifying mismatches and participating in DNA repair, is the “housekeeping gene” in the mismatch repair (MMR) system. MSH2 deficiency has been reported to enhance cancer susceptibility for the association of hereditary nonpolyposis colorectal cancer. However, the expression and prognostic significance of MSH2 have not been studied from the perspective of pan-cancer. METHODS: The GTEx database was used to analyze the expression of MSH2 in normal tissues. The TCGA database was used to analyze the differential expression of MSH2 in pan-cancers. The prognostic value of MSH2 in pan-cancer was assessed using Cox regression and Kaplan-Meier analysis. Spearman correlations were used to measure the relationship between the expression level of MSH2 in pan-cancer and the level of immune infiltration, tumor mutational burden (TMB), and microsatellite instability (MSI). RESULTS: MSH2 is highly expressed in most type of cancers and significantly correlated with prognosis. In COAD, KIRC, LIHC, and SKCM, the expression of MSH2 was significantly positively correlated with the abundance of B cells, CD4+ T cells, CD8+ T cells, dendritic cells, macrophages, and neutrophils. In THCA, MSH2 expression correlated with CD8+T Cell showed a significant negative correlation. MSH2 had significantly negative correlations with stromal score and immune score in a variety of cancers and significantly correlated with TMB and MSI of a variety of tumors. CONCLUSIONS: MSH2 may play an important role in the occurrence, development, and immune infiltration of cancer. MSH2 can emerge as a potential biomarker for cancer diagnosis and prognosis.
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spelling pubmed-86324012021-12-01 Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics Qiu, Wenli Ding, Ke Liao, Lusheng Ling, Yongchang Luo, Xiaoqiong Wang, Junli Biomed Res Int Research Article BACKGROUND: MutS homolog 2 (MSH2), with the function of identifying mismatches and participating in DNA repair, is the “housekeeping gene” in the mismatch repair (MMR) system. MSH2 deficiency has been reported to enhance cancer susceptibility for the association of hereditary nonpolyposis colorectal cancer. However, the expression and prognostic significance of MSH2 have not been studied from the perspective of pan-cancer. METHODS: The GTEx database was used to analyze the expression of MSH2 in normal tissues. The TCGA database was used to analyze the differential expression of MSH2 in pan-cancers. The prognostic value of MSH2 in pan-cancer was assessed using Cox regression and Kaplan-Meier analysis. Spearman correlations were used to measure the relationship between the expression level of MSH2 in pan-cancer and the level of immune infiltration, tumor mutational burden (TMB), and microsatellite instability (MSI). RESULTS: MSH2 is highly expressed in most type of cancers and significantly correlated with prognosis. In COAD, KIRC, LIHC, and SKCM, the expression of MSH2 was significantly positively correlated with the abundance of B cells, CD4+ T cells, CD8+ T cells, dendritic cells, macrophages, and neutrophils. In THCA, MSH2 expression correlated with CD8+T Cell showed a significant negative correlation. MSH2 had significantly negative correlations with stromal score and immune score in a variety of cancers and significantly correlated with TMB and MSI of a variety of tumors. CONCLUSIONS: MSH2 may play an important role in the occurrence, development, and immune infiltration of cancer. MSH2 can emerge as a potential biomarker for cancer diagnosis and prognosis. Hindawi 2021-11-23 /pmc/articles/PMC8632401/ /pubmed/34859104 http://dx.doi.org/10.1155/2021/9485273 Text en Copyright © 2021 Wenli Qiu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Qiu, Wenli
Ding, Ke
Liao, Lusheng
Ling, Yongchang
Luo, Xiaoqiong
Wang, Junli
Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics
title Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics
title_full Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics
title_fullStr Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics
title_full_unstemmed Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics
title_short Analysis of the Expression and Prognostic Value of MSH2 in Pan-Cancer Based on Bioinformatics
title_sort analysis of the expression and prognostic value of msh2 in pan-cancer based on bioinformatics
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8632401/
https://www.ncbi.nlm.nih.gov/pubmed/34859104
http://dx.doi.org/10.1155/2021/9485273
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