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Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma
Oral microbiota can alter cancer susceptibility and progression by modulating metabolism and inflammation. We assessed the association between the oral microbiome and lymph node (LN) metastasis in oral squamous cell carcinoma (OSCC). We collected a total of 54 saliva samples from patients with OSCC...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8633319/ https://www.ncbi.nlm.nih.gov/pubmed/34848792 http://dx.doi.org/10.1038/s41598-021-02638-9 |
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author | Eun, Young-Gyu Lee, Jung-Woo Kim, Seung Woo Hyun, Dong-Wook Bae, Jin-Woo Lee, Young Chan |
author_facet | Eun, Young-Gyu Lee, Jung-Woo Kim, Seung Woo Hyun, Dong-Wook Bae, Jin-Woo Lee, Young Chan |
author_sort | Eun, Young-Gyu |
collection | PubMed |
description | Oral microbiota can alter cancer susceptibility and progression by modulating metabolism and inflammation. We assessed the association between the oral microbiome and lymph node (LN) metastasis in oral squamous cell carcinoma (OSCC). We collected a total of 54 saliva samples from patients with OSCC before surgery. LN metastasis was assessed based on postoperative pathological examination. We used QIIME2, linear discriminant analysis effect size (LEfSe), and PICRUSt2 methods to analyze microbial dysbiosis. A random forest classifier was used to assess whether the oral microbiome could predict LN metastasis. Among the 54 OSCC samples, 20 had LN metastasis, and 34 had no evidence of metastasis. There was a significant difference in β-diversity between the metastasis and no metastasis groups. Through LEfSe analysis, the metastasis group was enriched in the genera Prevotella, Stomatobaculum, Bifidobacterium, Peptostreptococcaceae, Shuttleworthia and Finegoldia. Pathways related to signal peptidase II were predominant in the no metastasis group. The RF model showed a modestly high accuracy for predicting metastasis. Differences in microbial community composition and functions were observed in the oral microbiome of patients with OSCC with and without LN metastasis. However, the finding that specific taxa may be associated with LN metastasis should be verified in a further prospective study. |
format | Online Article Text |
id | pubmed-8633319 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-86333192021-12-03 Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma Eun, Young-Gyu Lee, Jung-Woo Kim, Seung Woo Hyun, Dong-Wook Bae, Jin-Woo Lee, Young Chan Sci Rep Article Oral microbiota can alter cancer susceptibility and progression by modulating metabolism and inflammation. We assessed the association between the oral microbiome and lymph node (LN) metastasis in oral squamous cell carcinoma (OSCC). We collected a total of 54 saliva samples from patients with OSCC before surgery. LN metastasis was assessed based on postoperative pathological examination. We used QIIME2, linear discriminant analysis effect size (LEfSe), and PICRUSt2 methods to analyze microbial dysbiosis. A random forest classifier was used to assess whether the oral microbiome could predict LN metastasis. Among the 54 OSCC samples, 20 had LN metastasis, and 34 had no evidence of metastasis. There was a significant difference in β-diversity between the metastasis and no metastasis groups. Through LEfSe analysis, the metastasis group was enriched in the genera Prevotella, Stomatobaculum, Bifidobacterium, Peptostreptococcaceae, Shuttleworthia and Finegoldia. Pathways related to signal peptidase II were predominant in the no metastasis group. The RF model showed a modestly high accuracy for predicting metastasis. Differences in microbial community composition and functions were observed in the oral microbiome of patients with OSCC with and without LN metastasis. However, the finding that specific taxa may be associated with LN metastasis should be verified in a further prospective study. Nature Publishing Group UK 2021-11-30 /pmc/articles/PMC8633319/ /pubmed/34848792 http://dx.doi.org/10.1038/s41598-021-02638-9 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Eun, Young-Gyu Lee, Jung-Woo Kim, Seung Woo Hyun, Dong-Wook Bae, Jin-Woo Lee, Young Chan Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma |
title | Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma |
title_full | Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma |
title_fullStr | Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma |
title_full_unstemmed | Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma |
title_short | Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma |
title_sort | oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8633319/ https://www.ncbi.nlm.nih.gov/pubmed/34848792 http://dx.doi.org/10.1038/s41598-021-02638-9 |
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