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A new test for autism spectrum disorder: Metabolic data from different cell types

Experiments employing the Phenotype Mammalian Microarray (PM-M) technology were performed on lymphoblastoid cell lines (LCLs) from individuals with autism spectrum disorder (ASD) and age-matched controls. We used the custom-made PM-M plate designed to assess differential utilization of the amino aci...

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Autores principales: Srikanth, Sujata, Cascio, Lauren, Pauly, Rini, Jones, Kelly, Sorrow, Skylar, Cubillan, Rossana, Chen, Chin-Fu, Skinner, Cindy D., Champaigne, Kevin, Stevenson, Roger E., Schwartz, Charles E., Boccuto, Luigi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8633810/
https://www.ncbi.nlm.nih.gov/pubmed/34877376
http://dx.doi.org/10.1016/j.dib.2021.107598
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author Srikanth, Sujata
Cascio, Lauren
Pauly, Rini
Jones, Kelly
Sorrow, Skylar
Cubillan, Rossana
Chen, Chin-Fu
Skinner, Cindy D.
Champaigne, Kevin
Stevenson, Roger E.
Schwartz, Charles E.
Boccuto, Luigi
author_facet Srikanth, Sujata
Cascio, Lauren
Pauly, Rini
Jones, Kelly
Sorrow, Skylar
Cubillan, Rossana
Chen, Chin-Fu
Skinner, Cindy D.
Champaigne, Kevin
Stevenson, Roger E.
Schwartz, Charles E.
Boccuto, Luigi
author_sort Srikanth, Sujata
collection PubMed
description Experiments employing the Phenotype Mammalian Microarray (PM-M) technology were performed on lymphoblastoid cell lines (LCLs) from individuals with autism spectrum disorder (ASD) and age-matched controls. We used the custom-made PM-M plate designed to assess differential utilization of the amino acid tryptophan. Multiple parameters such as the sample size, incubation time, and cell concentration have been tested, leading to optimized protocols and minimized background noise by variable selection while controlling for false discoveries. The assay generated data based on the production of nicotinamide adenine dinucleotide (NADH) in the presence of different compounds containing tryptophan and showed clear differences between ASD and control samples.
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spelling pubmed-86338102021-12-06 A new test for autism spectrum disorder: Metabolic data from different cell types Srikanth, Sujata Cascio, Lauren Pauly, Rini Jones, Kelly Sorrow, Skylar Cubillan, Rossana Chen, Chin-Fu Skinner, Cindy D. Champaigne, Kevin Stevenson, Roger E. Schwartz, Charles E. Boccuto, Luigi Data Brief Data Article Experiments employing the Phenotype Mammalian Microarray (PM-M) technology were performed on lymphoblastoid cell lines (LCLs) from individuals with autism spectrum disorder (ASD) and age-matched controls. We used the custom-made PM-M plate designed to assess differential utilization of the amino acid tryptophan. Multiple parameters such as the sample size, incubation time, and cell concentration have been tested, leading to optimized protocols and minimized background noise by variable selection while controlling for false discoveries. The assay generated data based on the production of nicotinamide adenine dinucleotide (NADH) in the presence of different compounds containing tryptophan and showed clear differences between ASD and control samples. Elsevier 2021-11-23 /pmc/articles/PMC8633810/ /pubmed/34877376 http://dx.doi.org/10.1016/j.dib.2021.107598 Text en © 2021 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Srikanth, Sujata
Cascio, Lauren
Pauly, Rini
Jones, Kelly
Sorrow, Skylar
Cubillan, Rossana
Chen, Chin-Fu
Skinner, Cindy D.
Champaigne, Kevin
Stevenson, Roger E.
Schwartz, Charles E.
Boccuto, Luigi
A new test for autism spectrum disorder: Metabolic data from different cell types
title A new test for autism spectrum disorder: Metabolic data from different cell types
title_full A new test for autism spectrum disorder: Metabolic data from different cell types
title_fullStr A new test for autism spectrum disorder: Metabolic data from different cell types
title_full_unstemmed A new test for autism spectrum disorder: Metabolic data from different cell types
title_short A new test for autism spectrum disorder: Metabolic data from different cell types
title_sort new test for autism spectrum disorder: metabolic data from different cell types
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8633810/
https://www.ncbi.nlm.nih.gov/pubmed/34877376
http://dx.doi.org/10.1016/j.dib.2021.107598
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