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A new test for autism spectrum disorder: Metabolic data from different cell types
Experiments employing the Phenotype Mammalian Microarray (PM-M) technology were performed on lymphoblastoid cell lines (LCLs) from individuals with autism spectrum disorder (ASD) and age-matched controls. We used the custom-made PM-M plate designed to assess differential utilization of the amino aci...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8633810/ https://www.ncbi.nlm.nih.gov/pubmed/34877376 http://dx.doi.org/10.1016/j.dib.2021.107598 |
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author | Srikanth, Sujata Cascio, Lauren Pauly, Rini Jones, Kelly Sorrow, Skylar Cubillan, Rossana Chen, Chin-Fu Skinner, Cindy D. Champaigne, Kevin Stevenson, Roger E. Schwartz, Charles E. Boccuto, Luigi |
author_facet | Srikanth, Sujata Cascio, Lauren Pauly, Rini Jones, Kelly Sorrow, Skylar Cubillan, Rossana Chen, Chin-Fu Skinner, Cindy D. Champaigne, Kevin Stevenson, Roger E. Schwartz, Charles E. Boccuto, Luigi |
author_sort | Srikanth, Sujata |
collection | PubMed |
description | Experiments employing the Phenotype Mammalian Microarray (PM-M) technology were performed on lymphoblastoid cell lines (LCLs) from individuals with autism spectrum disorder (ASD) and age-matched controls. We used the custom-made PM-M plate designed to assess differential utilization of the amino acid tryptophan. Multiple parameters such as the sample size, incubation time, and cell concentration have been tested, leading to optimized protocols and minimized background noise by variable selection while controlling for false discoveries. The assay generated data based on the production of nicotinamide adenine dinucleotide (NADH) in the presence of different compounds containing tryptophan and showed clear differences between ASD and control samples. |
format | Online Article Text |
id | pubmed-8633810 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-86338102021-12-06 A new test for autism spectrum disorder: Metabolic data from different cell types Srikanth, Sujata Cascio, Lauren Pauly, Rini Jones, Kelly Sorrow, Skylar Cubillan, Rossana Chen, Chin-Fu Skinner, Cindy D. Champaigne, Kevin Stevenson, Roger E. Schwartz, Charles E. Boccuto, Luigi Data Brief Data Article Experiments employing the Phenotype Mammalian Microarray (PM-M) technology were performed on lymphoblastoid cell lines (LCLs) from individuals with autism spectrum disorder (ASD) and age-matched controls. We used the custom-made PM-M plate designed to assess differential utilization of the amino acid tryptophan. Multiple parameters such as the sample size, incubation time, and cell concentration have been tested, leading to optimized protocols and minimized background noise by variable selection while controlling for false discoveries. The assay generated data based on the production of nicotinamide adenine dinucleotide (NADH) in the presence of different compounds containing tryptophan and showed clear differences between ASD and control samples. Elsevier 2021-11-23 /pmc/articles/PMC8633810/ /pubmed/34877376 http://dx.doi.org/10.1016/j.dib.2021.107598 Text en © 2021 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Srikanth, Sujata Cascio, Lauren Pauly, Rini Jones, Kelly Sorrow, Skylar Cubillan, Rossana Chen, Chin-Fu Skinner, Cindy D. Champaigne, Kevin Stevenson, Roger E. Schwartz, Charles E. Boccuto, Luigi A new test for autism spectrum disorder: Metabolic data from different cell types |
title | A new test for autism spectrum disorder: Metabolic data from different cell types |
title_full | A new test for autism spectrum disorder: Metabolic data from different cell types |
title_fullStr | A new test for autism spectrum disorder: Metabolic data from different cell types |
title_full_unstemmed | A new test for autism spectrum disorder: Metabolic data from different cell types |
title_short | A new test for autism spectrum disorder: Metabolic data from different cell types |
title_sort | new test for autism spectrum disorder: metabolic data from different cell types |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8633810/ https://www.ncbi.nlm.nih.gov/pubmed/34877376 http://dx.doi.org/10.1016/j.dib.2021.107598 |
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