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The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar

Purpose: To systematically analyze the overall m(6)A modification pattern in hyperplastic scars (HS). Methods: The m(6)A modification patterns in HS and normal skin (NS) tissues were described by m(6)A sequencing and RNA sequencing, and subsequently bioinformatics analysis was performed. The m(6)A-r...

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Autores principales: Liu, Si-Yu, Wu, Jun-Jie, Chen, Zhong-hua, Zou, Ming-Li, Teng, Ying-ying, Zhang, Kai-Wen, Li, Yue-Yue, Guo, Dang-yang, Yuan, Feng-Lai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8634666/
https://www.ncbi.nlm.nih.gov/pubmed/34869335
http://dx.doi.org/10.3389/fcell.2021.748703
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author Liu, Si-Yu
Wu, Jun-Jie
Chen, Zhong-hua
Zou, Ming-Li
Teng, Ying-ying
Zhang, Kai-Wen
Li, Yue-Yue
Guo, Dang-yang
Yuan, Feng-Lai
author_facet Liu, Si-Yu
Wu, Jun-Jie
Chen, Zhong-hua
Zou, Ming-Li
Teng, Ying-ying
Zhang, Kai-Wen
Li, Yue-Yue
Guo, Dang-yang
Yuan, Feng-Lai
author_sort Liu, Si-Yu
collection PubMed
description Purpose: To systematically analyze the overall m(6)A modification pattern in hyperplastic scars (HS). Methods: The m(6)A modification patterns in HS and normal skin (NS) tissues were described by m(6)A sequencing and RNA sequencing, and subsequently bioinformatics analysis was performed. The m(6)A-related RNA was immunoprecipitated and verified by real-time quantitative PCR. Results: The appearance of 14,791 new m(6)A peaks in the HS sample was accompanied by the disappearance of 7,835 peaks. The unique m(6)A-related genes in HS were thus associated with fibrosis-related pathways. We identified the differentially expressed mRNA transcripts in HS samples with hyper-methylated or hypo-methylated m(6)A peaks. Conclusion: This study is the first to map the m(6)A transcriptome of human HS, which may help clarify the possible mechanism of m(6)A-mediated gene expression regulation.
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spelling pubmed-86346662021-12-02 The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar Liu, Si-Yu Wu, Jun-Jie Chen, Zhong-hua Zou, Ming-Li Teng, Ying-ying Zhang, Kai-Wen Li, Yue-Yue Guo, Dang-yang Yuan, Feng-Lai Front Cell Dev Biol Cell and Developmental Biology Purpose: To systematically analyze the overall m(6)A modification pattern in hyperplastic scars (HS). Methods: The m(6)A modification patterns in HS and normal skin (NS) tissues were described by m(6)A sequencing and RNA sequencing, and subsequently bioinformatics analysis was performed. The m(6)A-related RNA was immunoprecipitated and verified by real-time quantitative PCR. Results: The appearance of 14,791 new m(6)A peaks in the HS sample was accompanied by the disappearance of 7,835 peaks. The unique m(6)A-related genes in HS were thus associated with fibrosis-related pathways. We identified the differentially expressed mRNA transcripts in HS samples with hyper-methylated or hypo-methylated m(6)A peaks. Conclusion: This study is the first to map the m(6)A transcriptome of human HS, which may help clarify the possible mechanism of m(6)A-mediated gene expression regulation. Frontiers Media S.A. 2021-11-15 /pmc/articles/PMC8634666/ /pubmed/34869335 http://dx.doi.org/10.3389/fcell.2021.748703 Text en Copyright © 2021 Liu, Wu, Chen, Zou, Teng, Zhang, Li, Guo and Yuan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Liu, Si-Yu
Wu, Jun-Jie
Chen, Zhong-hua
Zou, Ming-Li
Teng, Ying-ying
Zhang, Kai-Wen
Li, Yue-Yue
Guo, Dang-yang
Yuan, Feng-Lai
The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar
title The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar
title_full The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar
title_fullStr The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar
title_full_unstemmed The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar
title_short The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar
title_sort m(6)a rna modification modulates gene expression and fibrosis-related pathways in hypertrophic scar
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8634666/
https://www.ncbi.nlm.nih.gov/pubmed/34869335
http://dx.doi.org/10.3389/fcell.2021.748703
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