Cargando…
The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar
Purpose: To systematically analyze the overall m(6)A modification pattern in hyperplastic scars (HS). Methods: The m(6)A modification patterns in HS and normal skin (NS) tissues were described by m(6)A sequencing and RNA sequencing, and subsequently bioinformatics analysis was performed. The m(6)A-r...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8634666/ https://www.ncbi.nlm.nih.gov/pubmed/34869335 http://dx.doi.org/10.3389/fcell.2021.748703 |
_version_ | 1784608166882836480 |
---|---|
author | Liu, Si-Yu Wu, Jun-Jie Chen, Zhong-hua Zou, Ming-Li Teng, Ying-ying Zhang, Kai-Wen Li, Yue-Yue Guo, Dang-yang Yuan, Feng-Lai |
author_facet | Liu, Si-Yu Wu, Jun-Jie Chen, Zhong-hua Zou, Ming-Li Teng, Ying-ying Zhang, Kai-Wen Li, Yue-Yue Guo, Dang-yang Yuan, Feng-Lai |
author_sort | Liu, Si-Yu |
collection | PubMed |
description | Purpose: To systematically analyze the overall m(6)A modification pattern in hyperplastic scars (HS). Methods: The m(6)A modification patterns in HS and normal skin (NS) tissues were described by m(6)A sequencing and RNA sequencing, and subsequently bioinformatics analysis was performed. The m(6)A-related RNA was immunoprecipitated and verified by real-time quantitative PCR. Results: The appearance of 14,791 new m(6)A peaks in the HS sample was accompanied by the disappearance of 7,835 peaks. The unique m(6)A-related genes in HS were thus associated with fibrosis-related pathways. We identified the differentially expressed mRNA transcripts in HS samples with hyper-methylated or hypo-methylated m(6)A peaks. Conclusion: This study is the first to map the m(6)A transcriptome of human HS, which may help clarify the possible mechanism of m(6)A-mediated gene expression regulation. |
format | Online Article Text |
id | pubmed-8634666 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86346662021-12-02 The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar Liu, Si-Yu Wu, Jun-Jie Chen, Zhong-hua Zou, Ming-Li Teng, Ying-ying Zhang, Kai-Wen Li, Yue-Yue Guo, Dang-yang Yuan, Feng-Lai Front Cell Dev Biol Cell and Developmental Biology Purpose: To systematically analyze the overall m(6)A modification pattern in hyperplastic scars (HS). Methods: The m(6)A modification patterns in HS and normal skin (NS) tissues were described by m(6)A sequencing and RNA sequencing, and subsequently bioinformatics analysis was performed. The m(6)A-related RNA was immunoprecipitated and verified by real-time quantitative PCR. Results: The appearance of 14,791 new m(6)A peaks in the HS sample was accompanied by the disappearance of 7,835 peaks. The unique m(6)A-related genes in HS were thus associated with fibrosis-related pathways. We identified the differentially expressed mRNA transcripts in HS samples with hyper-methylated or hypo-methylated m(6)A peaks. Conclusion: This study is the first to map the m(6)A transcriptome of human HS, which may help clarify the possible mechanism of m(6)A-mediated gene expression regulation. Frontiers Media S.A. 2021-11-15 /pmc/articles/PMC8634666/ /pubmed/34869335 http://dx.doi.org/10.3389/fcell.2021.748703 Text en Copyright © 2021 Liu, Wu, Chen, Zou, Teng, Zhang, Li, Guo and Yuan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cell and Developmental Biology Liu, Si-Yu Wu, Jun-Jie Chen, Zhong-hua Zou, Ming-Li Teng, Ying-ying Zhang, Kai-Wen Li, Yue-Yue Guo, Dang-yang Yuan, Feng-Lai The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar |
title | The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar |
title_full | The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar |
title_fullStr | The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar |
title_full_unstemmed | The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar |
title_short | The m(6)A RNA Modification Modulates Gene Expression and Fibrosis-Related Pathways in Hypertrophic Scar |
title_sort | m(6)a rna modification modulates gene expression and fibrosis-related pathways in hypertrophic scar |
topic | Cell and Developmental Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8634666/ https://www.ncbi.nlm.nih.gov/pubmed/34869335 http://dx.doi.org/10.3389/fcell.2021.748703 |
work_keys_str_mv | AT liusiyu them6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT wujunjie them6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT chenzhonghua them6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT zoumingli them6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT tengyingying them6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT zhangkaiwen them6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT liyueyue them6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT guodangyang them6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT yuanfenglai them6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT liusiyu m6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT wujunjie m6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT chenzhonghua m6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT zoumingli m6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT tengyingying m6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT zhangkaiwen m6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT liyueyue m6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT guodangyang m6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar AT yuanfenglai m6arnamodificationmodulatesgeneexpressionandfibrosisrelatedpathwaysinhypertrophicscar |