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Identifying the Predictive Role of Oxidative Stress Genes in the Prognosis of Glioma Patients
BACKGROUND: Gliomas are primary aggressive brain tumors with poor prognoses. Oxidative stress plays a crucial role in the tumorigenesis and drug resistance of gliomas. The aim of the present study was to use integrated bioinformatics analyses to evaluate the prognostic value of oxidative stress-rela...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Scientific Literature, Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8634738/ https://www.ncbi.nlm.nih.gov/pubmed/34836934 http://dx.doi.org/10.12659/MSM.934161 |
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author | Lu, Di Yang, Ning Wang, Shuai Liu, Wenyu Zhang, Di Wang, Jian Huang, Bin Li, Xingang |
author_facet | Lu, Di Yang, Ning Wang, Shuai Liu, Wenyu Zhang, Di Wang, Jian Huang, Bin Li, Xingang |
author_sort | Lu, Di |
collection | PubMed |
description | BACKGROUND: Gliomas are primary aggressive brain tumors with poor prognoses. Oxidative stress plays a crucial role in the tumorigenesis and drug resistance of gliomas. The aim of the present study was to use integrated bioinformatics analyses to evaluate the prognostic value of oxidative stress-related genes (OSRGs) in glioma. MATERIAL/METHODS: Disease- and prognosis-associated OSRGs were identified using microarray and clinical data from the Chinese Glioma Genome Atlas database. Functional enrichment, gene-gene interaction, protein-protein interaction, and survival analyses were performed in screened OSRGs. The protein expression was validated by the Human Protein Atlas database. A risk score model was constructed and verified through Cox regression, receiver operating characteristic curve, principal component, and stratified analyses. The Cancer Genome Atlas (TCGA) database was used for external validation. A nomogram was constructed to facilitate the clinical application. RESULTS: Twenty-one disease-associated and 14 prognosis-associated OSRGs were identified. Enrichment analyses indicated that these signature OSRGs were involved in tumorigenesis and drug resistance of glioma. The risk score model demonstrated a significant difference in overall survival between the high- and low-risk groups. The area under the curve and hazard ratio (1.296) revealed the independent prognostic value of the model. The model exhibited good predictive efficacy in the TCGA cohort. A clinical nomogram was constructed to calculate survival rates in glioma patients at 1, 3, and 5 years. CONCLUSIONS: Our comprehensive study indicated that OSRGs were valuable for prognosis prediction in glioma, which provides a novel insight into the relationship between oxidative stress and glioma and a potential therapeutic strategy for glioma patients. |
format | Online Article Text |
id | pubmed-8634738 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | International Scientific Literature, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86347382021-12-14 Identifying the Predictive Role of Oxidative Stress Genes in the Prognosis of Glioma Patients Lu, Di Yang, Ning Wang, Shuai Liu, Wenyu Zhang, Di Wang, Jian Huang, Bin Li, Xingang Med Sci Monit Database Analysis BACKGROUND: Gliomas are primary aggressive brain tumors with poor prognoses. Oxidative stress plays a crucial role in the tumorigenesis and drug resistance of gliomas. The aim of the present study was to use integrated bioinformatics analyses to evaluate the prognostic value of oxidative stress-related genes (OSRGs) in glioma. MATERIAL/METHODS: Disease- and prognosis-associated OSRGs were identified using microarray and clinical data from the Chinese Glioma Genome Atlas database. Functional enrichment, gene-gene interaction, protein-protein interaction, and survival analyses were performed in screened OSRGs. The protein expression was validated by the Human Protein Atlas database. A risk score model was constructed and verified through Cox regression, receiver operating characteristic curve, principal component, and stratified analyses. The Cancer Genome Atlas (TCGA) database was used for external validation. A nomogram was constructed to facilitate the clinical application. RESULTS: Twenty-one disease-associated and 14 prognosis-associated OSRGs were identified. Enrichment analyses indicated that these signature OSRGs were involved in tumorigenesis and drug resistance of glioma. The risk score model demonstrated a significant difference in overall survival between the high- and low-risk groups. The area under the curve and hazard ratio (1.296) revealed the independent prognostic value of the model. The model exhibited good predictive efficacy in the TCGA cohort. A clinical nomogram was constructed to calculate survival rates in glioma patients at 1, 3, and 5 years. CONCLUSIONS: Our comprehensive study indicated that OSRGs were valuable for prognosis prediction in glioma, which provides a novel insight into the relationship between oxidative stress and glioma and a potential therapeutic strategy for glioma patients. International Scientific Literature, Inc. 2021-11-27 /pmc/articles/PMC8634738/ /pubmed/34836934 http://dx.doi.org/10.12659/MSM.934161 Text en © Med Sci Monit, 2021 https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under Creative Common Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) ) |
spellingShingle | Database Analysis Lu, Di Yang, Ning Wang, Shuai Liu, Wenyu Zhang, Di Wang, Jian Huang, Bin Li, Xingang Identifying the Predictive Role of Oxidative Stress Genes in the Prognosis of Glioma Patients |
title | Identifying the Predictive Role of Oxidative Stress Genes in the Prognosis of Glioma Patients |
title_full | Identifying the Predictive Role of Oxidative Stress Genes in the Prognosis of Glioma Patients |
title_fullStr | Identifying the Predictive Role of Oxidative Stress Genes in the Prognosis of Glioma Patients |
title_full_unstemmed | Identifying the Predictive Role of Oxidative Stress Genes in the Prognosis of Glioma Patients |
title_short | Identifying the Predictive Role of Oxidative Stress Genes in the Prognosis of Glioma Patients |
title_sort | identifying the predictive role of oxidative stress genes in the prognosis of glioma patients |
topic | Database Analysis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8634738/ https://www.ncbi.nlm.nih.gov/pubmed/34836934 http://dx.doi.org/10.12659/MSM.934161 |
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