Characterization of the complete chloroplast genome of the perennial plant Tradescantia ohiensis Raf. (Commelinales: Commelinaceae)

Tradescantia ohiensis Raf. (Ohio spiderwort/blue-jacket) is a perennial herb native to North America that has become widely established in China. The chloroplast (cp) genome of T. ohiensis was assembled using Illumina sequencing reads. It is 164,140 bp in length with an A + T-biased nucleotide compo...

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Detalles Bibliográficos
Autores principales: Liu, Yang, Liu, Guang-Chen, Xu, Ye
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8635560/
https://www.ncbi.nlm.nih.gov/pubmed/34869893
http://dx.doi.org/10.1080/23802359.2021.2005477
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author Liu, Yang
Liu, Guang-Chen
Xu, Ye
author_facet Liu, Yang
Liu, Guang-Chen
Xu, Ye
author_sort Liu, Yang
collection PubMed
description Tradescantia ohiensis Raf. (Ohio spiderwort/blue-jacket) is a perennial herb native to North America that has become widely established in China. The chloroplast (cp) genome of T. ohiensis was assembled using Illumina sequencing reads. It is 164,140 bp in length with an A + T-biased nucleotide composition, and comprises a large single-copy (LSC) region (91,248 bp), a small single-copy (SSC) region (18,426 bp), and a pair of inverted repeat (IR) regions (27,233 bp). The cp genome harbors a total of 112 gene species with 19 of them being completely or partially duplicated and 18 of them possessing one or two introns. Phylogenetic analysis suggests that T. ohiensis is most closely related to the congeneric T. virginiana.
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spelling pubmed-86355602021-12-02 Characterization of the complete chloroplast genome of the perennial plant Tradescantia ohiensis Raf. (Commelinales: Commelinaceae) Liu, Yang Liu, Guang-Chen Xu, Ye Mitochondrial DNA B Resour Mitogenome Announcement Tradescantia ohiensis Raf. (Ohio spiderwort/blue-jacket) is a perennial herb native to North America that has become widely established in China. The chloroplast (cp) genome of T. ohiensis was assembled using Illumina sequencing reads. It is 164,140 bp in length with an A + T-biased nucleotide composition, and comprises a large single-copy (LSC) region (91,248 bp), a small single-copy (SSC) region (18,426 bp), and a pair of inverted repeat (IR) regions (27,233 bp). The cp genome harbors a total of 112 gene species with 19 of them being completely or partially duplicated and 18 of them possessing one or two introns. Phylogenetic analysis suggests that T. ohiensis is most closely related to the congeneric T. virginiana. Taylor & Francis 2021-11-29 /pmc/articles/PMC8635560/ /pubmed/34869893 http://dx.doi.org/10.1080/23802359.2021.2005477 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Yang
Liu, Guang-Chen
Xu, Ye
Characterization of the complete chloroplast genome of the perennial plant Tradescantia ohiensis Raf. (Commelinales: Commelinaceae)
title Characterization of the complete chloroplast genome of the perennial plant Tradescantia ohiensis Raf. (Commelinales: Commelinaceae)
title_full Characterization of the complete chloroplast genome of the perennial plant Tradescantia ohiensis Raf. (Commelinales: Commelinaceae)
title_fullStr Characterization of the complete chloroplast genome of the perennial plant Tradescantia ohiensis Raf. (Commelinales: Commelinaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of the perennial plant Tradescantia ohiensis Raf. (Commelinales: Commelinaceae)
title_short Characterization of the complete chloroplast genome of the perennial plant Tradescantia ohiensis Raf. (Commelinales: Commelinaceae)
title_sort characterization of the complete chloroplast genome of the perennial plant tradescantia ohiensis raf. (commelinales: commelinaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8635560/
https://www.ncbi.nlm.nih.gov/pubmed/34869893
http://dx.doi.org/10.1080/23802359.2021.2005477
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