Whole-genome assembly and evolutionary analysis of the Malus kansuensis (Rosaceae) mitochondrion

Malus kansuensis, which belongs to the family Rosaceae, is an important apple rootstock resource in China. In the present study, the mitochondrial genome of M. kansuensis was sequenced and assembled by high-throughput sequencing (HTS). The genome was 385,436 bp in length, with an obvious (A + T) % b...

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Detalles Bibliográficos
Autores principales: Li, Lingli, Gu, Xiting, Ma, Jianwen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8635609/
https://www.ncbi.nlm.nih.gov/pubmed/34869889
http://dx.doi.org/10.1080/23802359.2021.2005473
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author Li, Lingli
Gu, Xiting
Ma, Jianwen
author_facet Li, Lingli
Gu, Xiting
Ma, Jianwen
author_sort Li, Lingli
collection PubMed
description Malus kansuensis, which belongs to the family Rosaceae, is an important apple rootstock resource in China. In the present study, the mitochondrial genome of M. kansuensis was sequenced and assembled by high-throughput sequencing (HTS). The genome was 385,436 bp in length, with an obvious (A + T) % bias over (G + C) %. The mitochondrial genome comprised 35 protein-coding genes, 21 tRNA genes, and 3 rRNA genes. The phylogenetic tree results showed that M. kansuensis is very close to M. domestica and M. hupehensis.
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spelling pubmed-86356092021-12-02 Whole-genome assembly and evolutionary analysis of the Malus kansuensis (Rosaceae) mitochondrion Li, Lingli Gu, Xiting Ma, Jianwen Mitochondrial DNA B Resour Mitogenome Announcement Malus kansuensis, which belongs to the family Rosaceae, is an important apple rootstock resource in China. In the present study, the mitochondrial genome of M. kansuensis was sequenced and assembled by high-throughput sequencing (HTS). The genome was 385,436 bp in length, with an obvious (A + T) % bias over (G + C) %. The mitochondrial genome comprised 35 protein-coding genes, 21 tRNA genes, and 3 rRNA genes. The phylogenetic tree results showed that M. kansuensis is very close to M. domestica and M. hupehensis. Taylor & Francis 2021-11-29 /pmc/articles/PMC8635609/ /pubmed/34869889 http://dx.doi.org/10.1080/23802359.2021.2005473 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Lingli
Gu, Xiting
Ma, Jianwen
Whole-genome assembly and evolutionary analysis of the Malus kansuensis (Rosaceae) mitochondrion
title Whole-genome assembly and evolutionary analysis of the Malus kansuensis (Rosaceae) mitochondrion
title_full Whole-genome assembly and evolutionary analysis of the Malus kansuensis (Rosaceae) mitochondrion
title_fullStr Whole-genome assembly and evolutionary analysis of the Malus kansuensis (Rosaceae) mitochondrion
title_full_unstemmed Whole-genome assembly and evolutionary analysis of the Malus kansuensis (Rosaceae) mitochondrion
title_short Whole-genome assembly and evolutionary analysis of the Malus kansuensis (Rosaceae) mitochondrion
title_sort whole-genome assembly and evolutionary analysis of the malus kansuensis (rosaceae) mitochondrion
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8635609/
https://www.ncbi.nlm.nih.gov/pubmed/34869889
http://dx.doi.org/10.1080/23802359.2021.2005473
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AT majianwen wholegenomeassemblyandevolutionaryanalysisofthemaluskansuensisrosaceaemitochondrion

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