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The complete mitochondrial genome of Rana johnsi (Smith, 2009) (Anura: Ranidae) and its phylogeny
Rana johnsi (Smith 2009) firstly considered as the member of genus Pseudorana, has been moved into the genus Rana. In this study, we sequenced the complete mitochondrial (mt) genome of R. johnsi using the Sanger method. The circular mt genome was 17,873 bp in length and contains 13 protein-coding ge...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8635646/ https://www.ncbi.nlm.nih.gov/pubmed/34869888 http://dx.doi.org/10.1080/23802359.2021.2002213 |
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author | Chen, Qing-Ping Wu, Lian Zhang, Shu-Sheng Liu, Lei-Lei Jin, Wan-Ting Zhang, Jia-Yong Zhang, Yong-Pu Yu, Dan-Na |
author_facet | Chen, Qing-Ping Wu, Lian Zhang, Shu-Sheng Liu, Lei-Lei Jin, Wan-Ting Zhang, Jia-Yong Zhang, Yong-Pu Yu, Dan-Na |
author_sort | Chen, Qing-Ping |
collection | PubMed |
description | Rana johnsi (Smith 2009) firstly considered as the member of genus Pseudorana, has been moved into the genus Rana. In this study, we sequenced the complete mitochondrial (mt) genome of R. johnsi using the Sanger method. The circular mt genome was 17,873 bp in length and contains 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosome RNA genes, and one control region. The overall nucleotide composition in majority-strand was 28% A, 29% T, 29% C, and 14% G. We discussed the phylogenetic relationship of R. johnsi in genus Rana using ML and BI analyses based on 13 PCGs. Excluding the clade of subgenus Lithobates, Rana draytonii was the basal clade to all other Rana species, which included R. johnsi as the basal clade. The monophyly of genus Rana was supported, whereas Pseudorana was failed to support. |
format | Online Article Text |
id | pubmed-8635646 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-86356462021-12-02 The complete mitochondrial genome of Rana johnsi (Smith, 2009) (Anura: Ranidae) and its phylogeny Chen, Qing-Ping Wu, Lian Zhang, Shu-Sheng Liu, Lei-Lei Jin, Wan-Ting Zhang, Jia-Yong Zhang, Yong-Pu Yu, Dan-Na Mitochondrial DNA B Resour Mitogenome Announcement Rana johnsi (Smith 2009) firstly considered as the member of genus Pseudorana, has been moved into the genus Rana. In this study, we sequenced the complete mitochondrial (mt) genome of R. johnsi using the Sanger method. The circular mt genome was 17,873 bp in length and contains 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosome RNA genes, and one control region. The overall nucleotide composition in majority-strand was 28% A, 29% T, 29% C, and 14% G. We discussed the phylogenetic relationship of R. johnsi in genus Rana using ML and BI analyses based on 13 PCGs. Excluding the clade of subgenus Lithobates, Rana draytonii was the basal clade to all other Rana species, which included R. johnsi as the basal clade. The monophyly of genus Rana was supported, whereas Pseudorana was failed to support. Taylor & Francis 2021-11-29 /pmc/articles/PMC8635646/ /pubmed/34869888 http://dx.doi.org/10.1080/23802359.2021.2002213 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Chen, Qing-Ping Wu, Lian Zhang, Shu-Sheng Liu, Lei-Lei Jin, Wan-Ting Zhang, Jia-Yong Zhang, Yong-Pu Yu, Dan-Na The complete mitochondrial genome of Rana johnsi (Smith, 2009) (Anura: Ranidae) and its phylogeny |
title | The complete mitochondrial genome of Rana johnsi (Smith, 2009) (Anura: Ranidae) and its phylogeny |
title_full | The complete mitochondrial genome of Rana johnsi (Smith, 2009) (Anura: Ranidae) and its phylogeny |
title_fullStr | The complete mitochondrial genome of Rana johnsi (Smith, 2009) (Anura: Ranidae) and its phylogeny |
title_full_unstemmed | The complete mitochondrial genome of Rana johnsi (Smith, 2009) (Anura: Ranidae) and its phylogeny |
title_short | The complete mitochondrial genome of Rana johnsi (Smith, 2009) (Anura: Ranidae) and its phylogeny |
title_sort | complete mitochondrial genome of rana johnsi (smith, 2009) (anura: ranidae) and its phylogeny |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8635646/ https://www.ncbi.nlm.nih.gov/pubmed/34869888 http://dx.doi.org/10.1080/23802359.2021.2002213 |
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