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Predicting the Prognosis of Esophageal Adenocarcinoma by a Pyroptosis-Related Gene Signature

Esophageal adenocarcinoma (EAC) is a highly malignant type of digestive tract cancers with a poor prognosis despite therapeutic advances. Pyroptosis is an inflammatory form of programmed cell death, whereas the role of pyroptosis in EAC remains largely unknown. Herein, we identified a pyroptosis-rel...

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Autores principales: Zeng, Ruijie, Huang, Shujie, Qiu, Xinqi, Zhuo, Zewei, Wu, Huihuan, Jiang, Lei, Sha, Weihong, Chen, Hao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637127/
https://www.ncbi.nlm.nih.gov/pubmed/34867395
http://dx.doi.org/10.3389/fphar.2021.767187
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author Zeng, Ruijie
Huang, Shujie
Qiu, Xinqi
Zhuo, Zewei
Wu, Huihuan
Jiang, Lei
Sha, Weihong
Chen, Hao
author_facet Zeng, Ruijie
Huang, Shujie
Qiu, Xinqi
Zhuo, Zewei
Wu, Huihuan
Jiang, Lei
Sha, Weihong
Chen, Hao
author_sort Zeng, Ruijie
collection PubMed
description Esophageal adenocarcinoma (EAC) is a highly malignant type of digestive tract cancers with a poor prognosis despite therapeutic advances. Pyroptosis is an inflammatory form of programmed cell death, whereas the role of pyroptosis in EAC remains largely unknown. Herein, we identified a pyroptosis-related five-gene signature that was significantly correlated with the survival of EAC patients in The Cancer Genome Atlas (TCGA) cohort and an independent validation dataset. In addition, a nomogram based on the signature was constructed with novel prognostic values. Moreover, the downregulation of GSDMB within the signature is notably correlated with enhanced DNA methylation. The pyroptosis-related signature might be related to the immune response and regulation of the tumor microenvironment. Several inhibitors including GDC-0879 and PD-0325901 are promising in reversing the altered differentially expressed genes in high-risk patients. Our findings provide insights into the involvement of pyroptosis in EAC progression and are promising in the risk assessment as well as the prognosis for EAC patients in clinical practice.
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spelling pubmed-86371272021-12-03 Predicting the Prognosis of Esophageal Adenocarcinoma by a Pyroptosis-Related Gene Signature Zeng, Ruijie Huang, Shujie Qiu, Xinqi Zhuo, Zewei Wu, Huihuan Jiang, Lei Sha, Weihong Chen, Hao Front Pharmacol Pharmacology Esophageal adenocarcinoma (EAC) is a highly malignant type of digestive tract cancers with a poor prognosis despite therapeutic advances. Pyroptosis is an inflammatory form of programmed cell death, whereas the role of pyroptosis in EAC remains largely unknown. Herein, we identified a pyroptosis-related five-gene signature that was significantly correlated with the survival of EAC patients in The Cancer Genome Atlas (TCGA) cohort and an independent validation dataset. In addition, a nomogram based on the signature was constructed with novel prognostic values. Moreover, the downregulation of GSDMB within the signature is notably correlated with enhanced DNA methylation. The pyroptosis-related signature might be related to the immune response and regulation of the tumor microenvironment. Several inhibitors including GDC-0879 and PD-0325901 are promising in reversing the altered differentially expressed genes in high-risk patients. Our findings provide insights into the involvement of pyroptosis in EAC progression and are promising in the risk assessment as well as the prognosis for EAC patients in clinical practice. Frontiers Media S.A. 2021-11-18 /pmc/articles/PMC8637127/ /pubmed/34867395 http://dx.doi.org/10.3389/fphar.2021.767187 Text en Copyright © 2021 Zeng, Huang, Qiu, Zhuo, Wu, Jiang, Sha and Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Pharmacology
Zeng, Ruijie
Huang, Shujie
Qiu, Xinqi
Zhuo, Zewei
Wu, Huihuan
Jiang, Lei
Sha, Weihong
Chen, Hao
Predicting the Prognosis of Esophageal Adenocarcinoma by a Pyroptosis-Related Gene Signature
title Predicting the Prognosis of Esophageal Adenocarcinoma by a Pyroptosis-Related Gene Signature
title_full Predicting the Prognosis of Esophageal Adenocarcinoma by a Pyroptosis-Related Gene Signature
title_fullStr Predicting the Prognosis of Esophageal Adenocarcinoma by a Pyroptosis-Related Gene Signature
title_full_unstemmed Predicting the Prognosis of Esophageal Adenocarcinoma by a Pyroptosis-Related Gene Signature
title_short Predicting the Prognosis of Esophageal Adenocarcinoma by a Pyroptosis-Related Gene Signature
title_sort predicting the prognosis of esophageal adenocarcinoma by a pyroptosis-related gene signature
topic Pharmacology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637127/
https://www.ncbi.nlm.nih.gov/pubmed/34867395
http://dx.doi.org/10.3389/fphar.2021.767187
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