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AURKB as a Promising Prognostic Biomarker in Hepatocellular Carcinoma
The Aurora kinases form a family of 3 genes encoding serine/threonine kinases and are involved in the regulation of cell division during the mitosis. This study was designed to investigate the prognostic role of Aurora kinases in hepatocellular carcinoma (HCC). In this study, we analyzed the express...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637395/ https://www.ncbi.nlm.nih.gov/pubmed/34866894 http://dx.doi.org/10.1177/11769343211057589 |
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author | Xiao, Jingchuan Zhang, Yingai |
author_facet | Xiao, Jingchuan Zhang, Yingai |
author_sort | Xiao, Jingchuan |
collection | PubMed |
description | The Aurora kinases form a family of 3 genes encoding serine/threonine kinases and are involved in the regulation of cell division during the mitosis. This study was designed to investigate the prognostic role of Aurora kinases in hepatocellular carcinoma (HCC). In this study, we analyzed the expression, overall survival (OS) data, promoter methylation level, and relationship with immunoinhibitors of Aurora kinases in patients with HCC from GEPIA2, UALCAN, OncoLnc, and TISIDB databases. Protein-protein interaction (PPI) network, gene ontology, Kyoto Encyclopedia of Genes and Genomes (KEGG), and Reactome pathway analysis were performed using the STRING database and Cytoscape software. We found that the mRNA expression, stages of HCC, and OS of AURKA and AURKB in HCC tissues were significantly different from control tissues, but there were significant inconsistencies in promoter methylation level and relationship with immunoinhibitors for AURKA and AURKB. None of the above items were significantly different for AURKC. Furthermore, a hub module including AURKA, AURKB, and AURKC was identified within the PPI network constructed with the Molecular Complex Detection (MCODE) plug-in in Cytoscape software. Our results show that AURKB could be a potential biomarker for HCC prognosis. |
format | Online Article Text |
id | pubmed-8637395 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-86373952021-12-03 AURKB as a Promising Prognostic Biomarker in Hepatocellular Carcinoma Xiao, Jingchuan Zhang, Yingai Evol Bioinform Online Original Research The Aurora kinases form a family of 3 genes encoding serine/threonine kinases and are involved in the regulation of cell division during the mitosis. This study was designed to investigate the prognostic role of Aurora kinases in hepatocellular carcinoma (HCC). In this study, we analyzed the expression, overall survival (OS) data, promoter methylation level, and relationship with immunoinhibitors of Aurora kinases in patients with HCC from GEPIA2, UALCAN, OncoLnc, and TISIDB databases. Protein-protein interaction (PPI) network, gene ontology, Kyoto Encyclopedia of Genes and Genomes (KEGG), and Reactome pathway analysis were performed using the STRING database and Cytoscape software. We found that the mRNA expression, stages of HCC, and OS of AURKA and AURKB in HCC tissues were significantly different from control tissues, but there were significant inconsistencies in promoter methylation level and relationship with immunoinhibitors for AURKA and AURKB. None of the above items were significantly different for AURKC. Furthermore, a hub module including AURKA, AURKB, and AURKC was identified within the PPI network constructed with the Molecular Complex Detection (MCODE) plug-in in Cytoscape software. Our results show that AURKB could be a potential biomarker for HCC prognosis. SAGE Publications 2021-11-24 /pmc/articles/PMC8637395/ /pubmed/34866894 http://dx.doi.org/10.1177/11769343211057589 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Xiao, Jingchuan Zhang, Yingai AURKB as a Promising Prognostic Biomarker in Hepatocellular Carcinoma |
title | AURKB as a Promising Prognostic Biomarker in Hepatocellular Carcinoma |
title_full | AURKB as a Promising Prognostic Biomarker in Hepatocellular Carcinoma |
title_fullStr | AURKB as a Promising Prognostic Biomarker in Hepatocellular Carcinoma |
title_full_unstemmed | AURKB as a Promising Prognostic Biomarker in Hepatocellular Carcinoma |
title_short | AURKB as a Promising Prognostic Biomarker in Hepatocellular Carcinoma |
title_sort | aurkb as a promising prognostic biomarker in hepatocellular carcinoma |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637395/ https://www.ncbi.nlm.nih.gov/pubmed/34866894 http://dx.doi.org/10.1177/11769343211057589 |
work_keys_str_mv | AT xiaojingchuan aurkbasapromisingprognosticbiomarkerinhepatocellularcarcinoma AT zhangyingai aurkbasapromisingprognosticbiomarkerinhepatocellularcarcinoma |