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A DNA damage repair gene‐associated signature predicts responses of patients with advanced soft‐tissue sarcoma to treatment with trabectedin

Predictive biomarkers of trabectedin represent an unmet need in advanced soft‐tissue sarcomas (STS). DNA damage repair (DDR) genes, involved in homologous recombination or nucleotide excision repair, had been previously described as biomarkers of trabectedin resistance or sensitivity, respectively....

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Autores principales: Moura, David S., Peña‐Chilet, Maria, Cordero Varela, Juan Antonio, Alvarez‐Alegret, Ramiro, Agra‐Pujol, Carolina, Izquierdo, Francisco, Ramos, Rafael, Ortega‐Medina, Luis, Martin‐Davila, Francisco, Castilla‐Ramirez, Carolina, Hernandez‐Leon, Carmen Nieves, Romagosa, Cleofe, Vaz Salgado, Maria Angeles, Lavernia, Javier, Bagué, Silvia, Mayodormo‐Aranda, Empar, Vicioso, Luis, Hernández Barceló, Jose Emilio, Rubio‐Casadevall, Jordi, de Juan, Ana, Fiaño‐Valverde, Maria Concepcion, Hindi, Nadia, Lopez‐Alvarez, Maria, Lacerenza, Serena, Dopazo, Joaquin, Gutierrez, Antonio, Alvarez, Rosa, Valverde, Claudia, Martinez‐Trufero, Javier, Martín‐Broto, Javier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637557/
https://www.ncbi.nlm.nih.gov/pubmed/33983674
http://dx.doi.org/10.1002/1878-0261.12996
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author Moura, David S.
Peña‐Chilet, Maria
Cordero Varela, Juan Antonio
Alvarez‐Alegret, Ramiro
Agra‐Pujol, Carolina
Izquierdo, Francisco
Ramos, Rafael
Ortega‐Medina, Luis
Martin‐Davila, Francisco
Castilla‐Ramirez, Carolina
Hernandez‐Leon, Carmen Nieves
Romagosa, Cleofe
Vaz Salgado, Maria Angeles
Lavernia, Javier
Bagué, Silvia
Mayodormo‐Aranda, Empar
Vicioso, Luis
Hernández Barceló, Jose Emilio
Rubio‐Casadevall, Jordi
de Juan, Ana
Fiaño‐Valverde, Maria Concepcion
Hindi, Nadia
Lopez‐Alvarez, Maria
Lacerenza, Serena
Dopazo, Joaquin
Gutierrez, Antonio
Alvarez, Rosa
Valverde, Claudia
Martinez‐Trufero, Javier
Martín‐Broto, Javier
author_facet Moura, David S.
Peña‐Chilet, Maria
Cordero Varela, Juan Antonio
Alvarez‐Alegret, Ramiro
Agra‐Pujol, Carolina
Izquierdo, Francisco
Ramos, Rafael
Ortega‐Medina, Luis
Martin‐Davila, Francisco
Castilla‐Ramirez, Carolina
Hernandez‐Leon, Carmen Nieves
Romagosa, Cleofe
Vaz Salgado, Maria Angeles
Lavernia, Javier
Bagué, Silvia
Mayodormo‐Aranda, Empar
Vicioso, Luis
Hernández Barceló, Jose Emilio
Rubio‐Casadevall, Jordi
de Juan, Ana
Fiaño‐Valverde, Maria Concepcion
Hindi, Nadia
Lopez‐Alvarez, Maria
Lacerenza, Serena
Dopazo, Joaquin
Gutierrez, Antonio
Alvarez, Rosa
Valverde, Claudia
Martinez‐Trufero, Javier
Martín‐Broto, Javier
author_sort Moura, David S.
collection PubMed
description Predictive biomarkers of trabectedin represent an unmet need in advanced soft‐tissue sarcomas (STS). DNA damage repair (DDR) genes, involved in homologous recombination or nucleotide excision repair, had been previously described as biomarkers of trabectedin resistance or sensitivity, respectively. The majority of these studies only focused on specific factors (ERCC1, ERCC5, and BRCA1) and did not evaluate several other DDR‐related genes that could have a relevant role for trabectedin efficacy. In this retrospective translational study, 118 genes involved in DDR were evaluated to determine, by transcriptomics, a predictive gene signature of trabectedin efficacy. A six‐gene predictive signature of trabectedin efficacy was built in a series of 139 tumor samples from patients with advanced STS. Patients in the high‐risk gene signature group showed a significantly worse progression‐free survival compared with patients in the low‐risk group (2.1 vs 6.0 months, respectively). Differential gene expression analysis defined new potential predictive biomarkers of trabectedin sensitivity (PARP3 and CCNH) or resistance (DNAJB11 and PARP1). Our study identified a new gene signature that significantly predicts patients with higher probability to respond to treatment with trabectedin. Targeting some genes of this signature emerges as a potential strategy to enhance trabectedin efficacy.
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spelling pubmed-86375572021-12-09 A DNA damage repair gene‐associated signature predicts responses of patients with advanced soft‐tissue sarcoma to treatment with trabectedin Moura, David S. Peña‐Chilet, Maria Cordero Varela, Juan Antonio Alvarez‐Alegret, Ramiro Agra‐Pujol, Carolina Izquierdo, Francisco Ramos, Rafael Ortega‐Medina, Luis Martin‐Davila, Francisco Castilla‐Ramirez, Carolina Hernandez‐Leon, Carmen Nieves Romagosa, Cleofe Vaz Salgado, Maria Angeles Lavernia, Javier Bagué, Silvia Mayodormo‐Aranda, Empar Vicioso, Luis Hernández Barceló, Jose Emilio Rubio‐Casadevall, Jordi de Juan, Ana Fiaño‐Valverde, Maria Concepcion Hindi, Nadia Lopez‐Alvarez, Maria Lacerenza, Serena Dopazo, Joaquin Gutierrez, Antonio Alvarez, Rosa Valverde, Claudia Martinez‐Trufero, Javier Martín‐Broto, Javier Mol Oncol Research Articles Predictive biomarkers of trabectedin represent an unmet need in advanced soft‐tissue sarcomas (STS). DNA damage repair (DDR) genes, involved in homologous recombination or nucleotide excision repair, had been previously described as biomarkers of trabectedin resistance or sensitivity, respectively. The majority of these studies only focused on specific factors (ERCC1, ERCC5, and BRCA1) and did not evaluate several other DDR‐related genes that could have a relevant role for trabectedin efficacy. In this retrospective translational study, 118 genes involved in DDR were evaluated to determine, by transcriptomics, a predictive gene signature of trabectedin efficacy. A six‐gene predictive signature of trabectedin efficacy was built in a series of 139 tumor samples from patients with advanced STS. Patients in the high‐risk gene signature group showed a significantly worse progression‐free survival compared with patients in the low‐risk group (2.1 vs 6.0 months, respectively). Differential gene expression analysis defined new potential predictive biomarkers of trabectedin sensitivity (PARP3 and CCNH) or resistance (DNAJB11 and PARP1). Our study identified a new gene signature that significantly predicts patients with higher probability to respond to treatment with trabectedin. Targeting some genes of this signature emerges as a potential strategy to enhance trabectedin efficacy. John Wiley and Sons Inc. 2021-06-30 2021-12 /pmc/articles/PMC8637557/ /pubmed/33983674 http://dx.doi.org/10.1002/1878-0261.12996 Text en © 2021 The Authors. Molecular Oncology published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Moura, David S.
Peña‐Chilet, Maria
Cordero Varela, Juan Antonio
Alvarez‐Alegret, Ramiro
Agra‐Pujol, Carolina
Izquierdo, Francisco
Ramos, Rafael
Ortega‐Medina, Luis
Martin‐Davila, Francisco
Castilla‐Ramirez, Carolina
Hernandez‐Leon, Carmen Nieves
Romagosa, Cleofe
Vaz Salgado, Maria Angeles
Lavernia, Javier
Bagué, Silvia
Mayodormo‐Aranda, Empar
Vicioso, Luis
Hernández Barceló, Jose Emilio
Rubio‐Casadevall, Jordi
de Juan, Ana
Fiaño‐Valverde, Maria Concepcion
Hindi, Nadia
Lopez‐Alvarez, Maria
Lacerenza, Serena
Dopazo, Joaquin
Gutierrez, Antonio
Alvarez, Rosa
Valverde, Claudia
Martinez‐Trufero, Javier
Martín‐Broto, Javier
A DNA damage repair gene‐associated signature predicts responses of patients with advanced soft‐tissue sarcoma to treatment with trabectedin
title A DNA damage repair gene‐associated signature predicts responses of patients with advanced soft‐tissue sarcoma to treatment with trabectedin
title_full A DNA damage repair gene‐associated signature predicts responses of patients with advanced soft‐tissue sarcoma to treatment with trabectedin
title_fullStr A DNA damage repair gene‐associated signature predicts responses of patients with advanced soft‐tissue sarcoma to treatment with trabectedin
title_full_unstemmed A DNA damage repair gene‐associated signature predicts responses of patients with advanced soft‐tissue sarcoma to treatment with trabectedin
title_short A DNA damage repair gene‐associated signature predicts responses of patients with advanced soft‐tissue sarcoma to treatment with trabectedin
title_sort dna damage repair gene‐associated signature predicts responses of patients with advanced soft‐tissue sarcoma to treatment with trabectedin
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637557/
https://www.ncbi.nlm.nih.gov/pubmed/33983674
http://dx.doi.org/10.1002/1878-0261.12996
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