Cargando…
The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer
Introduction. Prostate cancer (PCa) is the most frequent cancer diagnosis in men worldwide. Our ability to identify those men whose cancer will decrease their lifespan and/or quality of life remains poor. The ReIMAGINE Consortium has been established to improve PCa diagnosis. Materials and methods....
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637844/ https://www.ncbi.nlm.nih.gov/pubmed/34870187 http://dx.doi.org/10.3389/frai.2021.769582 |
_version_ | 1784608828911779840 |
---|---|
author | Santaolalla, Aida Hulsen, Tim Davis, Jenson Ahmed, Hashim U. Moore, Caroline M. Punwani, Shonit Attard, Gert McCartan, Neil Emberton, Mark Coolen, Anthony Van Hemelrijck, Mieke |
author_facet | Santaolalla, Aida Hulsen, Tim Davis, Jenson Ahmed, Hashim U. Moore, Caroline M. Punwani, Shonit Attard, Gert McCartan, Neil Emberton, Mark Coolen, Anthony Van Hemelrijck, Mieke |
author_sort | Santaolalla, Aida |
collection | PubMed |
description | Introduction. Prostate cancer (PCa) is the most frequent cancer diagnosis in men worldwide. Our ability to identify those men whose cancer will decrease their lifespan and/or quality of life remains poor. The ReIMAGINE Consortium has been established to improve PCa diagnosis. Materials and methods. MRI will likely become the future cornerstone of the risk-stratification process for men at risk of early prostate cancer. We will, for the first time, be able to combine the underlying molecular changes in PCa with the state-of-the-art imaging. ReIMAGINE Screening invites men for MRI and PSA evaluation. ReIMAGINE Risk includes men at risk of prostate cancer based on MRI, and includes biomarker testing. Results. Baseline clinical information, genomics, blood, urine, fresh prostate tissue samples, digital pathology and radiomics data will be analysed. Data will be de-identified, stored with correlated mpMRI disease endotypes and linked with long term follow-up outcomes in an instance of the Philips Clinical Data Lake, consisting of cloud-based software. The ReIMAGINE platform includes application programming interfaces and a user interface that allows users to browse data, select cohorts, manage users and access rights, query data, and more. Connection to analytics tools such as Python allows statistical and stratification method pipelines to run profiling regression analyses. Discussion. The ReIMAGINE Multimodal Warehouse comprises a unique data source for PCa research, to improve risk stratification for PCa and inform clinical practice. The de-identified dataset characterized by clinical, imaging, genomics and digital pathology PCa patient phenotypes will be a valuable resource for the scientific and medical community. |
format | Online Article Text |
id | pubmed-8637844 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86378442021-12-03 The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer Santaolalla, Aida Hulsen, Tim Davis, Jenson Ahmed, Hashim U. Moore, Caroline M. Punwani, Shonit Attard, Gert McCartan, Neil Emberton, Mark Coolen, Anthony Van Hemelrijck, Mieke Front Artif Intell Artificial Intelligence Introduction. Prostate cancer (PCa) is the most frequent cancer diagnosis in men worldwide. Our ability to identify those men whose cancer will decrease their lifespan and/or quality of life remains poor. The ReIMAGINE Consortium has been established to improve PCa diagnosis. Materials and methods. MRI will likely become the future cornerstone of the risk-stratification process for men at risk of early prostate cancer. We will, for the first time, be able to combine the underlying molecular changes in PCa with the state-of-the-art imaging. ReIMAGINE Screening invites men for MRI and PSA evaluation. ReIMAGINE Risk includes men at risk of prostate cancer based on MRI, and includes biomarker testing. Results. Baseline clinical information, genomics, blood, urine, fresh prostate tissue samples, digital pathology and radiomics data will be analysed. Data will be de-identified, stored with correlated mpMRI disease endotypes and linked with long term follow-up outcomes in an instance of the Philips Clinical Data Lake, consisting of cloud-based software. The ReIMAGINE platform includes application programming interfaces and a user interface that allows users to browse data, select cohorts, manage users and access rights, query data, and more. Connection to analytics tools such as Python allows statistical and stratification method pipelines to run profiling regression analyses. Discussion. The ReIMAGINE Multimodal Warehouse comprises a unique data source for PCa research, to improve risk stratification for PCa and inform clinical practice. The de-identified dataset characterized by clinical, imaging, genomics and digital pathology PCa patient phenotypes will be a valuable resource for the scientific and medical community. Frontiers Media S.A. 2021-11-16 /pmc/articles/PMC8637844/ /pubmed/34870187 http://dx.doi.org/10.3389/frai.2021.769582 Text en Copyright © 2021 Santaolalla, Hulsen, Davis, Ahmed, Moore, Punwani, Attard, McCartan, Emberton, Coolen and Van Hemelrijck. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Artificial Intelligence Santaolalla, Aida Hulsen, Tim Davis, Jenson Ahmed, Hashim U. Moore, Caroline M. Punwani, Shonit Attard, Gert McCartan, Neil Emberton, Mark Coolen, Anthony Van Hemelrijck, Mieke The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer |
title | The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer |
title_full | The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer |
title_fullStr | The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer |
title_full_unstemmed | The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer |
title_short | The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer |
title_sort | reimagine multimodal warehouse: using artificial intelligence for accurate risk stratification of prostate cancer |
topic | Artificial Intelligence |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637844/ https://www.ncbi.nlm.nih.gov/pubmed/34870187 http://dx.doi.org/10.3389/frai.2021.769582 |
work_keys_str_mv | AT santaolallaaida thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT hulsentim thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT davisjenson thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT ahmedhashimu thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT moorecarolinem thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT punwanishonit thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT attardgert thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT mccartanneil thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT embertonmark thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT coolenanthony thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT vanhemelrijckmieke thereimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT santaolallaaida reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT hulsentim reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT davisjenson reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT ahmedhashimu reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT moorecarolinem reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT punwanishonit reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT attardgert reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT mccartanneil reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT embertonmark reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT coolenanthony reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer AT vanhemelrijckmieke reimaginemultimodalwarehouseusingartificialintelligenceforaccurateriskstratificationofprostatecancer |