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The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer

Introduction. Prostate cancer (PCa) is the most frequent cancer diagnosis in men worldwide. Our ability to identify those men whose cancer will decrease their lifespan and/or quality of life remains poor. The ReIMAGINE Consortium has been established to improve PCa diagnosis. Materials and methods....

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Autores principales: Santaolalla, Aida, Hulsen, Tim, Davis, Jenson, Ahmed, Hashim U., Moore, Caroline M., Punwani, Shonit, Attard, Gert, McCartan, Neil, Emberton, Mark, Coolen, Anthony, Van Hemelrijck, Mieke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637844/
https://www.ncbi.nlm.nih.gov/pubmed/34870187
http://dx.doi.org/10.3389/frai.2021.769582
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author Santaolalla, Aida
Hulsen, Tim
Davis, Jenson
Ahmed, Hashim U.
Moore, Caroline M.
Punwani, Shonit
Attard, Gert
McCartan, Neil
Emberton, Mark
Coolen, Anthony
Van Hemelrijck, Mieke
author_facet Santaolalla, Aida
Hulsen, Tim
Davis, Jenson
Ahmed, Hashim U.
Moore, Caroline M.
Punwani, Shonit
Attard, Gert
McCartan, Neil
Emberton, Mark
Coolen, Anthony
Van Hemelrijck, Mieke
author_sort Santaolalla, Aida
collection PubMed
description Introduction. Prostate cancer (PCa) is the most frequent cancer diagnosis in men worldwide. Our ability to identify those men whose cancer will decrease their lifespan and/or quality of life remains poor. The ReIMAGINE Consortium has been established to improve PCa diagnosis. Materials and methods. MRI will likely become the future cornerstone of the risk-stratification process for men at risk of early prostate cancer. We will, for the first time, be able to combine the underlying molecular changes in PCa with the state-of-the-art imaging. ReIMAGINE Screening invites men for MRI and PSA evaluation. ReIMAGINE Risk includes men at risk of prostate cancer based on MRI, and includes biomarker testing. Results. Baseline clinical information, genomics, blood, urine, fresh prostate tissue samples, digital pathology and radiomics data will be analysed. Data will be de-identified, stored with correlated mpMRI disease endotypes and linked with long term follow-up outcomes in an instance of the Philips Clinical Data Lake, consisting of cloud-based software. The ReIMAGINE platform includes application programming interfaces and a user interface that allows users to browse data, select cohorts, manage users and access rights, query data, and more. Connection to analytics tools such as Python allows statistical and stratification method pipelines to run profiling regression analyses. Discussion. The ReIMAGINE Multimodal Warehouse comprises a unique data source for PCa research, to improve risk stratification for PCa and inform clinical practice. The de-identified dataset characterized by clinical, imaging, genomics and digital pathology PCa patient phenotypes will be a valuable resource for the scientific and medical community.
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spelling pubmed-86378442021-12-03 The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer Santaolalla, Aida Hulsen, Tim Davis, Jenson Ahmed, Hashim U. Moore, Caroline M. Punwani, Shonit Attard, Gert McCartan, Neil Emberton, Mark Coolen, Anthony Van Hemelrijck, Mieke Front Artif Intell Artificial Intelligence Introduction. Prostate cancer (PCa) is the most frequent cancer diagnosis in men worldwide. Our ability to identify those men whose cancer will decrease their lifespan and/or quality of life remains poor. The ReIMAGINE Consortium has been established to improve PCa diagnosis. Materials and methods. MRI will likely become the future cornerstone of the risk-stratification process for men at risk of early prostate cancer. We will, for the first time, be able to combine the underlying molecular changes in PCa with the state-of-the-art imaging. ReIMAGINE Screening invites men for MRI and PSA evaluation. ReIMAGINE Risk includes men at risk of prostate cancer based on MRI, and includes biomarker testing. Results. Baseline clinical information, genomics, blood, urine, fresh prostate tissue samples, digital pathology and radiomics data will be analysed. Data will be de-identified, stored with correlated mpMRI disease endotypes and linked with long term follow-up outcomes in an instance of the Philips Clinical Data Lake, consisting of cloud-based software. The ReIMAGINE platform includes application programming interfaces and a user interface that allows users to browse data, select cohorts, manage users and access rights, query data, and more. Connection to analytics tools such as Python allows statistical and stratification method pipelines to run profiling regression analyses. Discussion. The ReIMAGINE Multimodal Warehouse comprises a unique data source for PCa research, to improve risk stratification for PCa and inform clinical practice. The de-identified dataset characterized by clinical, imaging, genomics and digital pathology PCa patient phenotypes will be a valuable resource for the scientific and medical community. Frontiers Media S.A. 2021-11-16 /pmc/articles/PMC8637844/ /pubmed/34870187 http://dx.doi.org/10.3389/frai.2021.769582 Text en Copyright © 2021 Santaolalla, Hulsen, Davis, Ahmed, Moore, Punwani, Attard, McCartan, Emberton, Coolen and Van Hemelrijck. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Artificial Intelligence
Santaolalla, Aida
Hulsen, Tim
Davis, Jenson
Ahmed, Hashim U.
Moore, Caroline M.
Punwani, Shonit
Attard, Gert
McCartan, Neil
Emberton, Mark
Coolen, Anthony
Van Hemelrijck, Mieke
The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer
title The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer
title_full The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer
title_fullStr The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer
title_full_unstemmed The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer
title_short The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer
title_sort reimagine multimodal warehouse: using artificial intelligence for accurate risk stratification of prostate cancer
topic Artificial Intelligence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8637844/
https://www.ncbi.nlm.nih.gov/pubmed/34870187
http://dx.doi.org/10.3389/frai.2021.769582
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