Cargando…

Genomic markers on synthetic genomes

Genome synthesis endows scientists the ability of de novo creating genomes absent in nature, by thorough redesigning DNA sequences and introducing numerous custom features. However, the genome synthesis is a labor‐ and time‐consuming work, and thus it is a challenge to verify and quantify the synthe...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhao, Hao‐Qian, Wei, Wen‐Qing, Zhao, Chao, Xie, Ze‐Xiong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8638323/
https://www.ncbi.nlm.nih.gov/pubmed/34899119
http://dx.doi.org/10.1002/elsc.202100030
_version_ 1784608930273427456
author Zhao, Hao‐Qian
Wei, Wen‐Qing
Zhao, Chao
Xie, Ze‐Xiong
author_facet Zhao, Hao‐Qian
Wei, Wen‐Qing
Zhao, Chao
Xie, Ze‐Xiong
author_sort Zhao, Hao‐Qian
collection PubMed
description Genome synthesis endows scientists the ability of de novo creating genomes absent in nature, by thorough redesigning DNA sequences and introducing numerous custom features. However, the genome synthesis is a labor‐ and time‐consuming work, and thus it is a challenge to verify and quantify the synthetic genome rapidly and precisely. Thus, specific DNA sequences different from native genomic sequences are designed into synthetic genomes during synthesis, namely genomic markers. Genomic markers can be easily detected by PCR reaction, whole‐genome sequencing (WGS) and a variety of methods to identify the synthetic genome from native one. Here, we review types and applications of genomic markers utilized in synthetic genomes, with the hope of providing a guidance for future works.
format Online
Article
Text
id pubmed-8638323
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-86383232021-12-09 Genomic markers on synthetic genomes Zhao, Hao‐Qian Wei, Wen‐Qing Zhao, Chao Xie, Ze‐Xiong Eng Life Sci Reviews Genome synthesis endows scientists the ability of de novo creating genomes absent in nature, by thorough redesigning DNA sequences and introducing numerous custom features. However, the genome synthesis is a labor‐ and time‐consuming work, and thus it is a challenge to verify and quantify the synthetic genome rapidly and precisely. Thus, specific DNA sequences different from native genomic sequences are designed into synthetic genomes during synthesis, namely genomic markers. Genomic markers can be easily detected by PCR reaction, whole‐genome sequencing (WGS) and a variety of methods to identify the synthetic genome from native one. Here, we review types and applications of genomic markers utilized in synthetic genomes, with the hope of providing a guidance for future works. John Wiley and Sons Inc. 2021-11-10 /pmc/articles/PMC8638323/ /pubmed/34899119 http://dx.doi.org/10.1002/elsc.202100030 Text en © 2021 The Authors. Engineering in Life Sciences published by Wiley‐VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Reviews
Zhao, Hao‐Qian
Wei, Wen‐Qing
Zhao, Chao
Xie, Ze‐Xiong
Genomic markers on synthetic genomes
title Genomic markers on synthetic genomes
title_full Genomic markers on synthetic genomes
title_fullStr Genomic markers on synthetic genomes
title_full_unstemmed Genomic markers on synthetic genomes
title_short Genomic markers on synthetic genomes
title_sort genomic markers on synthetic genomes
topic Reviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8638323/
https://www.ncbi.nlm.nih.gov/pubmed/34899119
http://dx.doi.org/10.1002/elsc.202100030
work_keys_str_mv AT zhaohaoqian genomicmarkersonsyntheticgenomes
AT weiwenqing genomicmarkersonsyntheticgenomes
AT zhaochao genomicmarkersonsyntheticgenomes
AT xiezexiong genomicmarkersonsyntheticgenomes