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On the use of aggregated human mobility data to estimate the reproduction number

The reproduction number of an infectious disease, such as CoViD-19, can be described through a modified version of the susceptible-infected-recovered (SIR) model with time-dependent contact rate, where mobility data are used as proxy of average movement trends and interpersonal distances. We introdu...

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Autores principales: Vanni, Fabio, Lambert, David, Palatella, Luigi, Grigolini, Paolo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8639785/
https://www.ncbi.nlm.nih.gov/pubmed/34857840
http://dx.doi.org/10.1038/s41598-021-02760-8
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author Vanni, Fabio
Lambert, David
Palatella, Luigi
Grigolini, Paolo
author_facet Vanni, Fabio
Lambert, David
Palatella, Luigi
Grigolini, Paolo
author_sort Vanni, Fabio
collection PubMed
description The reproduction number of an infectious disease, such as CoViD-19, can be described through a modified version of the susceptible-infected-recovered (SIR) model with time-dependent contact rate, where mobility data are used as proxy of average movement trends and interpersonal distances. We introduce a theoretical framework to explain and predict changes in the reproduction number of SARS-CoV-2 in terms of aggregated individual mobility and interpersonal proximity (alongside other epidemiological and environmental variables) during and after the lockdown period. We use an infection-age structured model described by a renewal equation. The model predicts the evolution of the reproduction number up to a week ahead of well-established estimates used in the literature. We show how lockdown policies, via reduction of proximity and mobility, reduce the impact of CoViD-19 and mitigate the risk of disease resurgence. We validate our theoretical framework using data from Google, Voxel51, Unacast, The CoViD-19 Mobility Data Network, and Analisi Distribuzione Aiuti.
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spelling pubmed-86397852021-12-06 On the use of aggregated human mobility data to estimate the reproduction number Vanni, Fabio Lambert, David Palatella, Luigi Grigolini, Paolo Sci Rep Article The reproduction number of an infectious disease, such as CoViD-19, can be described through a modified version of the susceptible-infected-recovered (SIR) model with time-dependent contact rate, where mobility data are used as proxy of average movement trends and interpersonal distances. We introduce a theoretical framework to explain and predict changes in the reproduction number of SARS-CoV-2 in terms of aggregated individual mobility and interpersonal proximity (alongside other epidemiological and environmental variables) during and after the lockdown period. We use an infection-age structured model described by a renewal equation. The model predicts the evolution of the reproduction number up to a week ahead of well-established estimates used in the literature. We show how lockdown policies, via reduction of proximity and mobility, reduce the impact of CoViD-19 and mitigate the risk of disease resurgence. We validate our theoretical framework using data from Google, Voxel51, Unacast, The CoViD-19 Mobility Data Network, and Analisi Distribuzione Aiuti. Nature Publishing Group UK 2021-12-02 /pmc/articles/PMC8639785/ /pubmed/34857840 http://dx.doi.org/10.1038/s41598-021-02760-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Vanni, Fabio
Lambert, David
Palatella, Luigi
Grigolini, Paolo
On the use of aggregated human mobility data to estimate the reproduction number
title On the use of aggregated human mobility data to estimate the reproduction number
title_full On the use of aggregated human mobility data to estimate the reproduction number
title_fullStr On the use of aggregated human mobility data to estimate the reproduction number
title_full_unstemmed On the use of aggregated human mobility data to estimate the reproduction number
title_short On the use of aggregated human mobility data to estimate the reproduction number
title_sort on the use of aggregated human mobility data to estimate the reproduction number
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8639785/
https://www.ncbi.nlm.nih.gov/pubmed/34857840
http://dx.doi.org/10.1038/s41598-021-02760-8
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