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The complete chloroplast genome of Casuarina cunninghamiana (Casuarinaceae)
Casuarina cunninghamiana Miq. naturally occurs in eastern Australia from New South Wales to north Queensland. After being introduced to China, it has become an important tree species of ecological shelter plantations in coastal areas of southern China. In this study, the complete chloroplast (cp) ge...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8641684/ https://www.ncbi.nlm.nih.gov/pubmed/34869899 http://dx.doi.org/10.1080/23802359.2021.2005492 |
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author | Li, Zhen Zhang, Yong Wei, Yong-cheng Meng, Jing-xiang Wang, Yu-jiao |
author_facet | Li, Zhen Zhang, Yong Wei, Yong-cheng Meng, Jing-xiang Wang, Yu-jiao |
author_sort | Li, Zhen |
collection | PubMed |
description | Casuarina cunninghamiana Miq. naturally occurs in eastern Australia from New South Wales to north Queensland. After being introduced to China, it has become an important tree species of ecological shelter plantations in coastal areas of southern China. In this study, the complete chloroplast (cp) genome of C. cunninghamiana was sequenced and analyzed based on the Illumina NovaSeq 6000 platform. The cp genome of C. cunninghamiana was found to be 15,6129 bp in length, including a large single copy (LSC) region of 86,200 bp and a small single copy (SSC) region of 18,457 bp, which were separated by two inverted repeats (IRs) of 25,736 bp. The cp genome contains 132 genes, consisting of 87 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The overall GC content of the cp genome was 36.34%. The phylogenetic analyses indicated that C. cunninghamiana was closely related to C. glauca and C. equisetifolia and clustered with 4 Betulaceae species. |
format | Online Article Text |
id | pubmed-8641684 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-86416842021-12-04 The complete chloroplast genome of Casuarina cunninghamiana (Casuarinaceae) Li, Zhen Zhang, Yong Wei, Yong-cheng Meng, Jing-xiang Wang, Yu-jiao Mitochondrial DNA B Resour Mitogenome Announcement Casuarina cunninghamiana Miq. naturally occurs in eastern Australia from New South Wales to north Queensland. After being introduced to China, it has become an important tree species of ecological shelter plantations in coastal areas of southern China. In this study, the complete chloroplast (cp) genome of C. cunninghamiana was sequenced and analyzed based on the Illumina NovaSeq 6000 platform. The cp genome of C. cunninghamiana was found to be 15,6129 bp in length, including a large single copy (LSC) region of 86,200 bp and a small single copy (SSC) region of 18,457 bp, which were separated by two inverted repeats (IRs) of 25,736 bp. The cp genome contains 132 genes, consisting of 87 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The overall GC content of the cp genome was 36.34%. The phylogenetic analyses indicated that C. cunninghamiana was closely related to C. glauca and C. equisetifolia and clustered with 4 Betulaceae species. Taylor & Francis 2021-11-30 /pmc/articles/PMC8641684/ /pubmed/34869899 http://dx.doi.org/10.1080/23802359.2021.2005492 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Zhen Zhang, Yong Wei, Yong-cheng Meng, Jing-xiang Wang, Yu-jiao The complete chloroplast genome of Casuarina cunninghamiana (Casuarinaceae) |
title | The complete chloroplast genome of Casuarina cunninghamiana (Casuarinaceae) |
title_full | The complete chloroplast genome of Casuarina cunninghamiana (Casuarinaceae) |
title_fullStr | The complete chloroplast genome of Casuarina cunninghamiana (Casuarinaceae) |
title_full_unstemmed | The complete chloroplast genome of Casuarina cunninghamiana (Casuarinaceae) |
title_short | The complete chloroplast genome of Casuarina cunninghamiana (Casuarinaceae) |
title_sort | complete chloroplast genome of casuarina cunninghamiana (casuarinaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8641684/ https://www.ncbi.nlm.nih.gov/pubmed/34869899 http://dx.doi.org/10.1080/23802359.2021.2005492 |
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