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Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia
Acute myeloid leukaemia (AML) is a heterogeneous disease with a difficult to predict prognosis. Ferroptosis, an iron‐induced programmed cell death, is a promising target for cancer therapy. Nevertheless, not much is known about the relationship between ferroptosis‐related genes and AML prognosis. He...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8642683/ https://www.ncbi.nlm.nih.gov/pubmed/34741393 http://dx.doi.org/10.1111/jcmm.17013 |
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author | Shao, Ruonan Wang, Huizhong Liu, Wenjian Wang, Jingzi Lu, Shujing Tang, Hailin Lu, Yue |
author_facet | Shao, Ruonan Wang, Huizhong Liu, Wenjian Wang, Jingzi Lu, Shujing Tang, Hailin Lu, Yue |
author_sort | Shao, Ruonan |
collection | PubMed |
description | Acute myeloid leukaemia (AML) is a heterogeneous disease with a difficult to predict prognosis. Ferroptosis, an iron‐induced programmed cell death, is a promising target for cancer therapy. Nevertheless, not much is known about the relationship between ferroptosis‐related genes and AML prognosis. Herein, we retrieved RNA profile and corresponding clinical data of AML patients from the Gene Expression Omnibus (GEO) and The Cancer Genome Atlas (TCGA) databases. Univariate Cox analysis was employed to identify ferroptosis‐related genes significantly associated with AML prognosis. Next, the least absolute shrinkage and selection operator (LASSO) regression was employed to establish a prognostic ferroptosis‐related gene profile. 12 ferroptosis‐related genes were screened to generate a prognostic model, which stratified patients into a low‐ (LR) or high‐risk (HR) group. Using Kaplan‐Meier analysis, we demonstrated that the LR patients exhibited better prognosis than HR patients. Moreover, receiver operating characteristic (ROC) curve analysis confirmed that the prognostic model showed good predictability. Functional enrichment analysis indicated that the infiltration of regulatory T cells (Treg) differed vastly between the LR and HR groups. Our prognostic model can offer guidance into the accurate prediction of AML prognosis and selection of personalized therapy in clinical practice. |
format | Online Article Text |
id | pubmed-8642683 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86426832021-12-15 Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia Shao, Ruonan Wang, Huizhong Liu, Wenjian Wang, Jingzi Lu, Shujing Tang, Hailin Lu, Yue J Cell Mol Med Original Articles Acute myeloid leukaemia (AML) is a heterogeneous disease with a difficult to predict prognosis. Ferroptosis, an iron‐induced programmed cell death, is a promising target for cancer therapy. Nevertheless, not much is known about the relationship between ferroptosis‐related genes and AML prognosis. Herein, we retrieved RNA profile and corresponding clinical data of AML patients from the Gene Expression Omnibus (GEO) and The Cancer Genome Atlas (TCGA) databases. Univariate Cox analysis was employed to identify ferroptosis‐related genes significantly associated with AML prognosis. Next, the least absolute shrinkage and selection operator (LASSO) regression was employed to establish a prognostic ferroptosis‐related gene profile. 12 ferroptosis‐related genes were screened to generate a prognostic model, which stratified patients into a low‐ (LR) or high‐risk (HR) group. Using Kaplan‐Meier analysis, we demonstrated that the LR patients exhibited better prognosis than HR patients. Moreover, receiver operating characteristic (ROC) curve analysis confirmed that the prognostic model showed good predictability. Functional enrichment analysis indicated that the infiltration of regulatory T cells (Treg) differed vastly between the LR and HR groups. Our prognostic model can offer guidance into the accurate prediction of AML prognosis and selection of personalized therapy in clinical practice. John Wiley and Sons Inc. 2021-11-05 2021-12 /pmc/articles/PMC8642683/ /pubmed/34741393 http://dx.doi.org/10.1111/jcmm.17013 Text en © 2021 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Shao, Ruonan Wang, Huizhong Liu, Wenjian Wang, Jingzi Lu, Shujing Tang, Hailin Lu, Yue Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia |
title | Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia |
title_full | Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia |
title_fullStr | Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia |
title_full_unstemmed | Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia |
title_short | Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia |
title_sort | establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8642683/ https://www.ncbi.nlm.nih.gov/pubmed/34741393 http://dx.doi.org/10.1111/jcmm.17013 |
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