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Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia

Acute myeloid leukaemia (AML) is a heterogeneous disease with a difficult to predict prognosis. Ferroptosis, an iron‐induced programmed cell death, is a promising target for cancer therapy. Nevertheless, not much is known about the relationship between ferroptosis‐related genes and AML prognosis. He...

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Autores principales: Shao, Ruonan, Wang, Huizhong, Liu, Wenjian, Wang, Jingzi, Lu, Shujing, Tang, Hailin, Lu, Yue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8642683/
https://www.ncbi.nlm.nih.gov/pubmed/34741393
http://dx.doi.org/10.1111/jcmm.17013
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author Shao, Ruonan
Wang, Huizhong
Liu, Wenjian
Wang, Jingzi
Lu, Shujing
Tang, Hailin
Lu, Yue
author_facet Shao, Ruonan
Wang, Huizhong
Liu, Wenjian
Wang, Jingzi
Lu, Shujing
Tang, Hailin
Lu, Yue
author_sort Shao, Ruonan
collection PubMed
description Acute myeloid leukaemia (AML) is a heterogeneous disease with a difficult to predict prognosis. Ferroptosis, an iron‐induced programmed cell death, is a promising target for cancer therapy. Nevertheless, not much is known about the relationship between ferroptosis‐related genes and AML prognosis. Herein, we retrieved RNA profile and corresponding clinical data of AML patients from the Gene Expression Omnibus (GEO) and The Cancer Genome Atlas (TCGA) databases. Univariate Cox analysis was employed to identify ferroptosis‐related genes significantly associated with AML prognosis. Next, the least absolute shrinkage and selection operator (LASSO) regression was employed to establish a prognostic ferroptosis‐related gene profile. 12 ferroptosis‐related genes were screened to generate a prognostic model, which stratified patients into a low‐ (LR) or high‐risk (HR) group. Using Kaplan‐Meier analysis, we demonstrated that the LR patients exhibited better prognosis than HR patients. Moreover, receiver operating characteristic (ROC) curve analysis confirmed that the prognostic model showed good predictability. Functional enrichment analysis indicated that the infiltration of regulatory T cells (Treg) differed vastly between the LR and HR groups. Our prognostic model can offer guidance into the accurate prediction of AML prognosis and selection of personalized therapy in clinical practice.
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spelling pubmed-86426832021-12-15 Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia Shao, Ruonan Wang, Huizhong Liu, Wenjian Wang, Jingzi Lu, Shujing Tang, Hailin Lu, Yue J Cell Mol Med Original Articles Acute myeloid leukaemia (AML) is a heterogeneous disease with a difficult to predict prognosis. Ferroptosis, an iron‐induced programmed cell death, is a promising target for cancer therapy. Nevertheless, not much is known about the relationship between ferroptosis‐related genes and AML prognosis. Herein, we retrieved RNA profile and corresponding clinical data of AML patients from the Gene Expression Omnibus (GEO) and The Cancer Genome Atlas (TCGA) databases. Univariate Cox analysis was employed to identify ferroptosis‐related genes significantly associated with AML prognosis. Next, the least absolute shrinkage and selection operator (LASSO) regression was employed to establish a prognostic ferroptosis‐related gene profile. 12 ferroptosis‐related genes were screened to generate a prognostic model, which stratified patients into a low‐ (LR) or high‐risk (HR) group. Using Kaplan‐Meier analysis, we demonstrated that the LR patients exhibited better prognosis than HR patients. Moreover, receiver operating characteristic (ROC) curve analysis confirmed that the prognostic model showed good predictability. Functional enrichment analysis indicated that the infiltration of regulatory T cells (Treg) differed vastly between the LR and HR groups. Our prognostic model can offer guidance into the accurate prediction of AML prognosis and selection of personalized therapy in clinical practice. John Wiley and Sons Inc. 2021-11-05 2021-12 /pmc/articles/PMC8642683/ /pubmed/34741393 http://dx.doi.org/10.1111/jcmm.17013 Text en © 2021 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Shao, Ruonan
Wang, Huizhong
Liu, Wenjian
Wang, Jingzi
Lu, Shujing
Tang, Hailin
Lu, Yue
Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia
title Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia
title_full Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia
title_fullStr Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia
title_full_unstemmed Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia
title_short Establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia
title_sort establishment of a prognostic ferroptosis‐related gene profile in acute myeloid leukaemia
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8642683/
https://www.ncbi.nlm.nih.gov/pubmed/34741393
http://dx.doi.org/10.1111/jcmm.17013
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