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662. Using Machine Learning to Aid in the Diagnosis of Multisystem Inflammatory Syndrome in Children

BACKGROUND: Multisystem inflammatory syndrome in children (MIS-C) is a newly recognized inflammatory syndrome that occurs post Severe Acute Respiratory Syndrome-Coronavirus-2 (SARS-CoV-2) infection. It affects multiple organ systems - particularly cardiac, gastrointestinal, dermatologic and neurolog...

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Autores principales: Soneji, Maulin, Tan, John, Wong, Emily
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8644093/
http://dx.doi.org/10.1093/ofid/ofab466.859
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author Soneji, Maulin
Tan, John
Wong, Emily
author_facet Soneji, Maulin
Tan, John
Wong, Emily
author_sort Soneji, Maulin
collection PubMed
description BACKGROUND: Multisystem inflammatory syndrome in children (MIS-C) is a newly recognized inflammatory syndrome that occurs post Severe Acute Respiratory Syndrome-Coronavirus-2 (SARS-CoV-2) infection. It affects multiple organ systems - particularly cardiac, gastrointestinal, dermatologic and neurologic. Clinicians may have difficulty diagnosing MIS-C due to its novelty and similarity to Kawasaki disease. Our goal was to use machine learning to predict whether children would have MIS-C based on symptoms and laboratory values. METHODS: A retrospective review was conducted of patients admitted to Loma Linda University Children’s Hospital who were suspected of having MIS-C. Demographic, symptom (such as fever, abdominal pain, diarrhea, shock, etc), and laboratory data were collected from the electronic medical record. For the 115 patients and 20 laboratory values, there was a total of 130 missing values (5.7%). Missing laboratory values were imputed using the median value based on the presence or absence of MIS-C. The data were split into a training (93 patients, 80%) and testing (22 patients, 20%) set. The training set was used to train a random forest model and the testing set was used to evaluate model performance. R 4.0.2 was used for modeling with the following packages: tidymodels and randomForest. RESULTS: There were 115 patients of which 49 were females, and 77 were diagnosed with MIS-C. The median age of the patients with MIS-C was 115 months and 79 months for those without MIS-C. In the testing set, all 15 patients with MIS-C were classified correctly but of the 7 without MIS-C, the model predicted 4 of the patients correctly. This gives a sensitivity of 100% and specificity of 57%. When changing the seed and testing set, the sensitivity remained 100% but the specificity improved to 86%. The random forest algorithm showed that the most important features were pro-calcitonin, ferritin, pro-BNP, and CRP. CONCLUSION: During the height of the SARS-CoV-2 pandemic, many children were being admitted with suspected MIS-C, but clinicians struggled to confirm the diagnosis. We have found a model predicting which of these patients had MIS-C with high sensitivity. This model is a first step of many toward creating the foundation of personalized medicine for children. DISCLOSURES: All Authors: No reported disclosures
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spelling pubmed-86440932021-12-06 662. Using Machine Learning to Aid in the Diagnosis of Multisystem Inflammatory Syndrome in Children Soneji, Maulin Tan, John Wong, Emily Open Forum Infect Dis Poster Abstracts BACKGROUND: Multisystem inflammatory syndrome in children (MIS-C) is a newly recognized inflammatory syndrome that occurs post Severe Acute Respiratory Syndrome-Coronavirus-2 (SARS-CoV-2) infection. It affects multiple organ systems - particularly cardiac, gastrointestinal, dermatologic and neurologic. Clinicians may have difficulty diagnosing MIS-C due to its novelty and similarity to Kawasaki disease. Our goal was to use machine learning to predict whether children would have MIS-C based on symptoms and laboratory values. METHODS: A retrospective review was conducted of patients admitted to Loma Linda University Children’s Hospital who were suspected of having MIS-C. Demographic, symptom (such as fever, abdominal pain, diarrhea, shock, etc), and laboratory data were collected from the electronic medical record. For the 115 patients and 20 laboratory values, there was a total of 130 missing values (5.7%). Missing laboratory values were imputed using the median value based on the presence or absence of MIS-C. The data were split into a training (93 patients, 80%) and testing (22 patients, 20%) set. The training set was used to train a random forest model and the testing set was used to evaluate model performance. R 4.0.2 was used for modeling with the following packages: tidymodels and randomForest. RESULTS: There were 115 patients of which 49 were females, and 77 were diagnosed with MIS-C. The median age of the patients with MIS-C was 115 months and 79 months for those without MIS-C. In the testing set, all 15 patients with MIS-C were classified correctly but of the 7 without MIS-C, the model predicted 4 of the patients correctly. This gives a sensitivity of 100% and specificity of 57%. When changing the seed and testing set, the sensitivity remained 100% but the specificity improved to 86%. The random forest algorithm showed that the most important features were pro-calcitonin, ferritin, pro-BNP, and CRP. CONCLUSION: During the height of the SARS-CoV-2 pandemic, many children were being admitted with suspected MIS-C, but clinicians struggled to confirm the diagnosis. We have found a model predicting which of these patients had MIS-C with high sensitivity. This model is a first step of many toward creating the foundation of personalized medicine for children. DISCLOSURES: All Authors: No reported disclosures Oxford University Press 2021-12-04 /pmc/articles/PMC8644093/ http://dx.doi.org/10.1093/ofid/ofab466.859 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Poster Abstracts
Soneji, Maulin
Tan, John
Wong, Emily
662. Using Machine Learning to Aid in the Diagnosis of Multisystem Inflammatory Syndrome in Children
title 662. Using Machine Learning to Aid in the Diagnosis of Multisystem Inflammatory Syndrome in Children
title_full 662. Using Machine Learning to Aid in the Diagnosis of Multisystem Inflammatory Syndrome in Children
title_fullStr 662. Using Machine Learning to Aid in the Diagnosis of Multisystem Inflammatory Syndrome in Children
title_full_unstemmed 662. Using Machine Learning to Aid in the Diagnosis of Multisystem Inflammatory Syndrome in Children
title_short 662. Using Machine Learning to Aid in the Diagnosis of Multisystem Inflammatory Syndrome in Children
title_sort 662. using machine learning to aid in the diagnosis of multisystem inflammatory syndrome in children
topic Poster Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8644093/
http://dx.doi.org/10.1093/ofid/ofab466.859
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