Cargando…
740. Elucidation of the Mode of Clostridioides difficile Transmission Based on One Health Approach
BACKGROUND: Community-onset Clostridioides difficile (C. difficile) infection (CACDI) has been increasing in recent years. To explore the transmission route of CACDI, we performed the whole-genome sequencing of C. difficile isolated from CACDI patients and compared it to the isolates from livestock,...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8645163/ http://dx.doi.org/10.1093/ofid/ofab466.937 |
_version_ | 1784610251747622912 |
---|---|
author | Yoshizawa, Sadako Sawa, Tomoka Komori, Kohji Sasaki, Masakazu Mori, Nobuaki Aoki, Kotaro Ishii, Yoshikazu Tateda, Kazuhiro |
author_facet | Yoshizawa, Sadako Sawa, Tomoka Komori, Kohji Sasaki, Masakazu Mori, Nobuaki Aoki, Kotaro Ishii, Yoshikazu Tateda, Kazuhiro |
author_sort | Yoshizawa, Sadako |
collection | PubMed |
description | BACKGROUND: Community-onset Clostridioides difficile (C. difficile) infection (CACDI) has been increasing in recent years. To explore the transmission route of CACDI, we performed the whole-genome sequencing of C. difficile isolated from CACDI patients and compared it to the isolates from livestock, companion animals, and soil. METHODS: From October 2020 until April 2021, fecal specimens of cattle, poultry, swine, felines, canines, CACDI patients, their families, and soil from the CACDI patients' living environment were applied for isolation of C.difficile. Whole-genome sequencing of C. difficile was performed on the MiSeq system (Illumina). Using the draft genome obtained from these analyses, the house-keeping gene (tpi), MLST, toxin genes (tcdA, tcdB, cdtA, cdtB), and resistance genes (gyrA, gyrB, rpoA, rpoB, rpoC) were comprehensively analyzed. RESULTS: As of March 31, 2021, 275 specimens were collected. Forty-five fecal specimens of companion animal origin (23 feline and 22 canines) were collected and the positive rate of C.difficile was 28.9% (2 felines, 11 canines). In MLST analysis, ST 15 (4 strains), ST 26 (2 strains), ST 42, ST 3, ST 28, ST 100, and ST 185 were detected in canines, and ST 203 and ST 297 strains were detected in felines. Samples of livestock origin were collected from 135 cattle, 41 poultries, and 20 swine. The detection rate in cattle was 11%, toxin-gene positivity was 60%. MLST analysis of 9 strains revealed ST 11 (5 strains), ST 2, ST 15, ST 58, and ST 101. No isolates were found from poultry or swine. Patient-derived strains of CACDI were collected from 14 patients at 2 sites. MLST analysis revealed ST42, ST37, ST100, and ST203(two isolates, respectively), ST 224, ST 81, ST 28, and ST 47. 2 isolates were unclassifiable. One case was a healthy 1-year-old girl, whose family revealed no isolation of C.difficile. Impressively, the soil in the parks (A and B) related to the child detected C.difficile from 4/4 samples (toxin-gene positivity; 75%) in Park A and 1/4 samples (toxin-gene positive) in Park B. MLST analysis demonstrated ST 42, the same as that in the affected child and core-genome single-nucleotide polymorphisms(SNPs) analysis suggested closely related strain. CONCLUSION: Our results suggest one health approach is fundamental to prevent the transmission of C.difficile. DISCLOSURES: All Authors: No reported disclosures |
format | Online Article Text |
id | pubmed-8645163 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-86451632021-12-06 740. Elucidation of the Mode of Clostridioides difficile Transmission Based on One Health Approach Yoshizawa, Sadako Sawa, Tomoka Komori, Kohji Sasaki, Masakazu Mori, Nobuaki Aoki, Kotaro Ishii, Yoshikazu Tateda, Kazuhiro Open Forum Infect Dis Poster Abstracts BACKGROUND: Community-onset Clostridioides difficile (C. difficile) infection (CACDI) has been increasing in recent years. To explore the transmission route of CACDI, we performed the whole-genome sequencing of C. difficile isolated from CACDI patients and compared it to the isolates from livestock, companion animals, and soil. METHODS: From October 2020 until April 2021, fecal specimens of cattle, poultry, swine, felines, canines, CACDI patients, their families, and soil from the CACDI patients' living environment were applied for isolation of C.difficile. Whole-genome sequencing of C. difficile was performed on the MiSeq system (Illumina). Using the draft genome obtained from these analyses, the house-keeping gene (tpi), MLST, toxin genes (tcdA, tcdB, cdtA, cdtB), and resistance genes (gyrA, gyrB, rpoA, rpoB, rpoC) were comprehensively analyzed. RESULTS: As of March 31, 2021, 275 specimens were collected. Forty-five fecal specimens of companion animal origin (23 feline and 22 canines) were collected and the positive rate of C.difficile was 28.9% (2 felines, 11 canines). In MLST analysis, ST 15 (4 strains), ST 26 (2 strains), ST 42, ST 3, ST 28, ST 100, and ST 185 were detected in canines, and ST 203 and ST 297 strains were detected in felines. Samples of livestock origin were collected from 135 cattle, 41 poultries, and 20 swine. The detection rate in cattle was 11%, toxin-gene positivity was 60%. MLST analysis of 9 strains revealed ST 11 (5 strains), ST 2, ST 15, ST 58, and ST 101. No isolates were found from poultry or swine. Patient-derived strains of CACDI were collected from 14 patients at 2 sites. MLST analysis revealed ST42, ST37, ST100, and ST203(two isolates, respectively), ST 224, ST 81, ST 28, and ST 47. 2 isolates were unclassifiable. One case was a healthy 1-year-old girl, whose family revealed no isolation of C.difficile. Impressively, the soil in the parks (A and B) related to the child detected C.difficile from 4/4 samples (toxin-gene positivity; 75%) in Park A and 1/4 samples (toxin-gene positive) in Park B. MLST analysis demonstrated ST 42, the same as that in the affected child and core-genome single-nucleotide polymorphisms(SNPs) analysis suggested closely related strain. CONCLUSION: Our results suggest one health approach is fundamental to prevent the transmission of C.difficile. DISCLOSURES: All Authors: No reported disclosures Oxford University Press 2021-12-04 /pmc/articles/PMC8645163/ http://dx.doi.org/10.1093/ofid/ofab466.937 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Poster Abstracts Yoshizawa, Sadako Sawa, Tomoka Komori, Kohji Sasaki, Masakazu Mori, Nobuaki Aoki, Kotaro Ishii, Yoshikazu Tateda, Kazuhiro 740. Elucidation of the Mode of Clostridioides difficile Transmission Based on One Health Approach |
title | 740. Elucidation of the Mode of Clostridioides difficile Transmission Based on One Health Approach |
title_full | 740. Elucidation of the Mode of Clostridioides difficile Transmission Based on One Health Approach |
title_fullStr | 740. Elucidation of the Mode of Clostridioides difficile Transmission Based on One Health Approach |
title_full_unstemmed | 740. Elucidation of the Mode of Clostridioides difficile Transmission Based on One Health Approach |
title_short | 740. Elucidation of the Mode of Clostridioides difficile Transmission Based on One Health Approach |
title_sort | 740. elucidation of the mode of clostridioides difficile transmission based on one health approach |
topic | Poster Abstracts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8645163/ http://dx.doi.org/10.1093/ofid/ofab466.937 |
work_keys_str_mv | AT yoshizawasadako 740elucidationofthemodeofclostridioidesdifficiletransmissionbasedononehealthapproach AT sawatomoka 740elucidationofthemodeofclostridioidesdifficiletransmissionbasedononehealthapproach AT komorikohji 740elucidationofthemodeofclostridioidesdifficiletransmissionbasedononehealthapproach AT sasakimasakazu 740elucidationofthemodeofclostridioidesdifficiletransmissionbasedononehealthapproach AT morinobuaki 740elucidationofthemodeofclostridioidesdifficiletransmissionbasedononehealthapproach AT aokikotaro 740elucidationofthemodeofclostridioidesdifficiletransmissionbasedononehealthapproach AT ishiiyoshikazu 740elucidationofthemodeofclostridioidesdifficiletransmissionbasedononehealthapproach AT tatedakazuhiro 740elucidationofthemodeofclostridioidesdifficiletransmissionbasedononehealthapproach |