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Integrating Clinical Data and Attentional CT Imaging Features for Esophageal Fistula Prediction in Esophageal Cancer
BACKGROUND AND PURPOSE: This study aims to develop a risk model to predict esophageal fistula in esophageal cancer (EC) patients by learning from both clinical data and computerized tomography (CT) radiomic features. MATERIALS AND METHODS: In this retrospective study, computerized tomography (CT) im...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8648603/ https://www.ncbi.nlm.nih.gov/pubmed/34888228 http://dx.doi.org/10.3389/fonc.2021.688706 |
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author | Xu, Yiyue Cui, Hui Dong, Taotao Zou, Bing Fan, Bingjie Li, Wanlong Wang, Shijiang Sun, Xindong Yu, Jinming Wang, Linlin |
author_facet | Xu, Yiyue Cui, Hui Dong, Taotao Zou, Bing Fan, Bingjie Li, Wanlong Wang, Shijiang Sun, Xindong Yu, Jinming Wang, Linlin |
author_sort | Xu, Yiyue |
collection | PubMed |
description | BACKGROUND AND PURPOSE: This study aims to develop a risk model to predict esophageal fistula in esophageal cancer (EC) patients by learning from both clinical data and computerized tomography (CT) radiomic features. MATERIALS AND METHODS: In this retrospective study, computerized tomography (CT) images and clinical data of 186 esophageal fistula patients and 372 controls (1:2 matched by the diagnosis time of EC, sex, marriage, and race) were collected. All patients had esophageal cancer and did not receive esophageal surgery. 70% patients were assigned into training set randomly and 30% into validation set. We firstly use a novel attentional convolutional neural network for radiographic descriptor extraction from nine views of planes of contextual CT, segmented tumor and neighboring structures. Then clinical factors including general, diagnostic, pathologic, therapeutic and hematological parameters are fed into neural network for high-level latent representation. The radiographic descriptors and latent clinical factor representations are finally associated by a fully connected layer for patient level risk prediction using SoftMax classifier. RESULTS: 512 deep radiographic features and 32 clinical features were extracted. The integrative deep learning model achieved C-index of 0.901, sensitivity of 0.835, and specificity of 0.918 on validation set with superior performance than non-integrative model using CT imaging alone (C-index = 0.857) or clinical data alone (C-index = 0.780). CONCLUSION: The integration of radiomic descriptors from CT and clinical data significantly improved the esophageal fistula prediction. We suggest that this model has the potential to support individualized stratification and treatment planning for EC patients. |
format | Online Article Text |
id | pubmed-8648603 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86486032021-12-08 Integrating Clinical Data and Attentional CT Imaging Features for Esophageal Fistula Prediction in Esophageal Cancer Xu, Yiyue Cui, Hui Dong, Taotao Zou, Bing Fan, Bingjie Li, Wanlong Wang, Shijiang Sun, Xindong Yu, Jinming Wang, Linlin Front Oncol Oncology BACKGROUND AND PURPOSE: This study aims to develop a risk model to predict esophageal fistula in esophageal cancer (EC) patients by learning from both clinical data and computerized tomography (CT) radiomic features. MATERIALS AND METHODS: In this retrospective study, computerized tomography (CT) images and clinical data of 186 esophageal fistula patients and 372 controls (1:2 matched by the diagnosis time of EC, sex, marriage, and race) were collected. All patients had esophageal cancer and did not receive esophageal surgery. 70% patients were assigned into training set randomly and 30% into validation set. We firstly use a novel attentional convolutional neural network for radiographic descriptor extraction from nine views of planes of contextual CT, segmented tumor and neighboring structures. Then clinical factors including general, diagnostic, pathologic, therapeutic and hematological parameters are fed into neural network for high-level latent representation. The radiographic descriptors and latent clinical factor representations are finally associated by a fully connected layer for patient level risk prediction using SoftMax classifier. RESULTS: 512 deep radiographic features and 32 clinical features were extracted. The integrative deep learning model achieved C-index of 0.901, sensitivity of 0.835, and specificity of 0.918 on validation set with superior performance than non-integrative model using CT imaging alone (C-index = 0.857) or clinical data alone (C-index = 0.780). CONCLUSION: The integration of radiomic descriptors from CT and clinical data significantly improved the esophageal fistula prediction. We suggest that this model has the potential to support individualized stratification and treatment planning for EC patients. Frontiers Media S.A. 2021-11-23 /pmc/articles/PMC8648603/ /pubmed/34888228 http://dx.doi.org/10.3389/fonc.2021.688706 Text en Copyright © 2021 Xu, Cui, Dong, Zou, Fan, Li, Wang, Sun, Yu and Wang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Xu, Yiyue Cui, Hui Dong, Taotao Zou, Bing Fan, Bingjie Li, Wanlong Wang, Shijiang Sun, Xindong Yu, Jinming Wang, Linlin Integrating Clinical Data and Attentional CT Imaging Features for Esophageal Fistula Prediction in Esophageal Cancer |
title | Integrating Clinical Data and Attentional CT Imaging Features for Esophageal Fistula Prediction in Esophageal Cancer |
title_full | Integrating Clinical Data and Attentional CT Imaging Features for Esophageal Fistula Prediction in Esophageal Cancer |
title_fullStr | Integrating Clinical Data and Attentional CT Imaging Features for Esophageal Fistula Prediction in Esophageal Cancer |
title_full_unstemmed | Integrating Clinical Data and Attentional CT Imaging Features for Esophageal Fistula Prediction in Esophageal Cancer |
title_short | Integrating Clinical Data and Attentional CT Imaging Features for Esophageal Fistula Prediction in Esophageal Cancer |
title_sort | integrating clinical data and attentional ct imaging features for esophageal fistula prediction in esophageal cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8648603/ https://www.ncbi.nlm.nih.gov/pubmed/34888228 http://dx.doi.org/10.3389/fonc.2021.688706 |
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