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Increased UBE2L6 regulated by type 1 interferon as potential marker in TB

The aim of this study is to identify potential biomarker of tuberculosis (TB) and determine its function. Differentially expressed mRNAs(DEGs) were selected from a blood database GSE101805, and then, 30 key genes were screened using STING, Cytoscape and further functionally enriched. We then found t...

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Autores principales: Gao, Jiao, Li, Chonghui, Li, Wenjing, Chen, Haotian, Fu, Yurong, Yi, Zhengjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8650027/
https://www.ncbi.nlm.nih.gov/pubmed/34773365
http://dx.doi.org/10.1111/jcmm.17046
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author Gao, Jiao
Li, Chonghui
Li, Wenjing
Chen, Haotian
Fu, Yurong
Yi, Zhengjun
author_facet Gao, Jiao
Li, Chonghui
Li, Wenjing
Chen, Haotian
Fu, Yurong
Yi, Zhengjun
author_sort Gao, Jiao
collection PubMed
description The aim of this study is to identify potential biomarker of tuberculosis (TB) and determine its function. Differentially expressed mRNAs(DEGs) were selected from a blood database GSE101805, and then, 30 key genes were screened using STING, Cytoscape and further functionally enriched. We then found that only 6 of 13 genes related to ubiquitination (the first in the functional enrichment) were increased significantly. ROC analysis showed that UBE2L6, among 6 genes, had the highest diagnostic value, and then, we found that it also had mild value in differential diagnosis. Moreover, our analysis showed that UBE2L6 may be upregulated by type I interferon, which was further confirmed by us. In addition, we also found that UBE2L6 inhibits the apoptosis of Mycobacterium tuberculosis(Mtb)infected macrophages. Subsequently, we discovered that miR‐146a‐5p, which may target UBE2L6, is reduced in peripheral blood mononuclear cells (PBMC) and plasma of TB, and it also had certain diagnostic efficiency(AUC=0.791). In brief, we demonstrated that UBE2L6 as well as miR‐146a‐5p is a potential biomarker for TB and UBE2L6,which may also plays important role in TB by, at least, modulating Mtb‐infected macrophage apoptosis.
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spelling pubmed-86500272021-12-20 Increased UBE2L6 regulated by type 1 interferon as potential marker in TB Gao, Jiao Li, Chonghui Li, Wenjing Chen, Haotian Fu, Yurong Yi, Zhengjun J Cell Mol Med Original Articles The aim of this study is to identify potential biomarker of tuberculosis (TB) and determine its function. Differentially expressed mRNAs(DEGs) were selected from a blood database GSE101805, and then, 30 key genes were screened using STING, Cytoscape and further functionally enriched. We then found that only 6 of 13 genes related to ubiquitination (the first in the functional enrichment) were increased significantly. ROC analysis showed that UBE2L6, among 6 genes, had the highest diagnostic value, and then, we found that it also had mild value in differential diagnosis. Moreover, our analysis showed that UBE2L6 may be upregulated by type I interferon, which was further confirmed by us. In addition, we also found that UBE2L6 inhibits the apoptosis of Mycobacterium tuberculosis(Mtb)infected macrophages. Subsequently, we discovered that miR‐146a‐5p, which may target UBE2L6, is reduced in peripheral blood mononuclear cells (PBMC) and plasma of TB, and it also had certain diagnostic efficiency(AUC=0.791). In brief, we demonstrated that UBE2L6 as well as miR‐146a‐5p is a potential biomarker for TB and UBE2L6,which may also plays important role in TB by, at least, modulating Mtb‐infected macrophage apoptosis. John Wiley and Sons Inc. 2021-11-12 2021-12 /pmc/articles/PMC8650027/ /pubmed/34773365 http://dx.doi.org/10.1111/jcmm.17046 Text en © 2021 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Gao, Jiao
Li, Chonghui
Li, Wenjing
Chen, Haotian
Fu, Yurong
Yi, Zhengjun
Increased UBE2L6 regulated by type 1 interferon as potential marker in TB
title Increased UBE2L6 regulated by type 1 interferon as potential marker in TB
title_full Increased UBE2L6 regulated by type 1 interferon as potential marker in TB
title_fullStr Increased UBE2L6 regulated by type 1 interferon as potential marker in TB
title_full_unstemmed Increased UBE2L6 regulated by type 1 interferon as potential marker in TB
title_short Increased UBE2L6 regulated by type 1 interferon as potential marker in TB
title_sort increased ube2l6 regulated by type 1 interferon as potential marker in tb
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8650027/
https://www.ncbi.nlm.nih.gov/pubmed/34773365
http://dx.doi.org/10.1111/jcmm.17046
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