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Genetic Architecture of Novel Sources for Reproductive Cold Tolerance in Sorghum

Enhancements in reproductive cold tolerance of sorghum are essential to expand growing areas into both high-latitude temperate areas and tropical high-altitude environments. Here we present first insights into the genetic architecture of this trait via genome-wide association studies in a broad gene...

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Autores principales: Chakrabarty, Subhadra, Kravcov, Natalja, Schaffasz, André, Snowdon, Rod J., Wittkop, Benjamin, Windpassinger, Steffen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8652046/
https://www.ncbi.nlm.nih.gov/pubmed/34899798
http://dx.doi.org/10.3389/fpls.2021.772177
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author Chakrabarty, Subhadra
Kravcov, Natalja
Schaffasz, André
Snowdon, Rod J.
Wittkop, Benjamin
Windpassinger, Steffen
author_facet Chakrabarty, Subhadra
Kravcov, Natalja
Schaffasz, André
Snowdon, Rod J.
Wittkop, Benjamin
Windpassinger, Steffen
author_sort Chakrabarty, Subhadra
collection PubMed
description Enhancements in reproductive cold tolerance of sorghum are essential to expand growing areas into both high-latitude temperate areas and tropical high-altitude environments. Here we present first insights into the genetic architecture of this trait via genome-wide association studies in a broad genetic diversity set (n = 330) phenotyped in multi-location field trials including high-altitude tropical (Mexico) and high-latitude temperate (Germany) environments. We observed a high degree of phenotypic variation and identified several novel, temperate-adapted accessions with superior and environmentally stable cold tolerance. Good heritability indicates strong potential for implementation of reproductive cold tolerance in breeding. Although the trait was found to be strongly quantitative, promising genomic regions with multiple-trait associations were found, including hotspots on chromosomes 3 and 10 which contain candidate genes implicated in different developmental and survival processes under abiotic stress conditions.
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spelling pubmed-86520462021-12-09 Genetic Architecture of Novel Sources for Reproductive Cold Tolerance in Sorghum Chakrabarty, Subhadra Kravcov, Natalja Schaffasz, André Snowdon, Rod J. Wittkop, Benjamin Windpassinger, Steffen Front Plant Sci Plant Science Enhancements in reproductive cold tolerance of sorghum are essential to expand growing areas into both high-latitude temperate areas and tropical high-altitude environments. Here we present first insights into the genetic architecture of this trait via genome-wide association studies in a broad genetic diversity set (n = 330) phenotyped in multi-location field trials including high-altitude tropical (Mexico) and high-latitude temperate (Germany) environments. We observed a high degree of phenotypic variation and identified several novel, temperate-adapted accessions with superior and environmentally stable cold tolerance. Good heritability indicates strong potential for implementation of reproductive cold tolerance in breeding. Although the trait was found to be strongly quantitative, promising genomic regions with multiple-trait associations were found, including hotspots on chromosomes 3 and 10 which contain candidate genes implicated in different developmental and survival processes under abiotic stress conditions. Frontiers Media S.A. 2021-11-24 /pmc/articles/PMC8652046/ /pubmed/34899798 http://dx.doi.org/10.3389/fpls.2021.772177 Text en Copyright © 2021 Chakrabarty, Kravcov, Schaffasz, Snowdon, Wittkop and Windpassinger. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Chakrabarty, Subhadra
Kravcov, Natalja
Schaffasz, André
Snowdon, Rod J.
Wittkop, Benjamin
Windpassinger, Steffen
Genetic Architecture of Novel Sources for Reproductive Cold Tolerance in Sorghum
title Genetic Architecture of Novel Sources for Reproductive Cold Tolerance in Sorghum
title_full Genetic Architecture of Novel Sources for Reproductive Cold Tolerance in Sorghum
title_fullStr Genetic Architecture of Novel Sources for Reproductive Cold Tolerance in Sorghum
title_full_unstemmed Genetic Architecture of Novel Sources for Reproductive Cold Tolerance in Sorghum
title_short Genetic Architecture of Novel Sources for Reproductive Cold Tolerance in Sorghum
title_sort genetic architecture of novel sources for reproductive cold tolerance in sorghum
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8652046/
https://www.ncbi.nlm.nih.gov/pubmed/34899798
http://dx.doi.org/10.3389/fpls.2021.772177
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