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A coarse‐refine segmentation network for COVID‐19 CT images

The rapid spread of the novel coronavirus disease 2019 (COVID‐19) causes a significant impact on public health. It is critical to diagnose COVID‐19 patients so that they can receive reasonable treatments quickly. The doctors can obtain a precise estimate of the infection's progression and decid...

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Autores principales: Huang, Ziwang, Li, Liang, Zhang, Xiang, Song, Ying, Chen, Jianwen, Zhao, Huiying, Chong, Yutian, Wu, Hejun, Yang, Yuedong, Shen, Jun, Zha, Yunfei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8653356/
https://www.ncbi.nlm.nih.gov/pubmed/34899976
http://dx.doi.org/10.1049/ipr2.12278
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author Huang, Ziwang
Li, Liang
Zhang, Xiang
Song, Ying
Chen, Jianwen
Zhao, Huiying
Chong, Yutian
Wu, Hejun
Yang, Yuedong
Shen, Jun
Zha, Yunfei
author_facet Huang, Ziwang
Li, Liang
Zhang, Xiang
Song, Ying
Chen, Jianwen
Zhao, Huiying
Chong, Yutian
Wu, Hejun
Yang, Yuedong
Shen, Jun
Zha, Yunfei
author_sort Huang, Ziwang
collection PubMed
description The rapid spread of the novel coronavirus disease 2019 (COVID‐19) causes a significant impact on public health. It is critical to diagnose COVID‐19 patients so that they can receive reasonable treatments quickly. The doctors can obtain a precise estimate of the infection's progression and decide more effective treatment options by segmenting the CT images of COVID‐19 patients. However, it is challenging to segment infected regions in CT slices because the infected regions are multi‐scale, and the boundary is not clear due to the low contrast between the infected area and the normal area. In this paper, a coarse‐refine segmentation network is proposed to address these challenges. The coarse‐refine architecture and hybrid loss is used to guide the model to predict the delicate structures with clear boundaries to address the problem of unclear boundaries. The atrous spatial pyramid pooling module in the network is added to improve the performance in detecting infected regions with different scales. Experimental results show that the model in the segmentation of COVID‐19 CT images outperforms other familiar medical segmentation models, enabling the doctor to get a more accurate estimate on the progression of the infection and thus can provide more reasonable treatment options.
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spelling pubmed-86533562021-12-08 A coarse‐refine segmentation network for COVID‐19 CT images Huang, Ziwang Li, Liang Zhang, Xiang Song, Ying Chen, Jianwen Zhao, Huiying Chong, Yutian Wu, Hejun Yang, Yuedong Shen, Jun Zha, Yunfei IET Image Process Original Research Papers The rapid spread of the novel coronavirus disease 2019 (COVID‐19) causes a significant impact on public health. It is critical to diagnose COVID‐19 patients so that they can receive reasonable treatments quickly. The doctors can obtain a precise estimate of the infection's progression and decide more effective treatment options by segmenting the CT images of COVID‐19 patients. However, it is challenging to segment infected regions in CT slices because the infected regions are multi‐scale, and the boundary is not clear due to the low contrast between the infected area and the normal area. In this paper, a coarse‐refine segmentation network is proposed to address these challenges. The coarse‐refine architecture and hybrid loss is used to guide the model to predict the delicate structures with clear boundaries to address the problem of unclear boundaries. The atrous spatial pyramid pooling module in the network is added to improve the performance in detecting infected regions with different scales. Experimental results show that the model in the segmentation of COVID‐19 CT images outperforms other familiar medical segmentation models, enabling the doctor to get a more accurate estimate on the progression of the infection and thus can provide more reasonable treatment options. John Wiley and Sons Inc. 2021-11-18 2022-02 /pmc/articles/PMC8653356/ /pubmed/34899976 http://dx.doi.org/10.1049/ipr2.12278 Text en © 2021 The Authors. IET Image Processing published by John Wiley & Sons Ltd on behalf of The Institution of Engineering and Technology https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research Papers
Huang, Ziwang
Li, Liang
Zhang, Xiang
Song, Ying
Chen, Jianwen
Zhao, Huiying
Chong, Yutian
Wu, Hejun
Yang, Yuedong
Shen, Jun
Zha, Yunfei
A coarse‐refine segmentation network for COVID‐19 CT images
title A coarse‐refine segmentation network for COVID‐19 CT images
title_full A coarse‐refine segmentation network for COVID‐19 CT images
title_fullStr A coarse‐refine segmentation network for COVID‐19 CT images
title_full_unstemmed A coarse‐refine segmentation network for COVID‐19 CT images
title_short A coarse‐refine segmentation network for COVID‐19 CT images
title_sort coarse‐refine segmentation network for covid‐19 ct images
topic Original Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8653356/
https://www.ncbi.nlm.nih.gov/pubmed/34899976
http://dx.doi.org/10.1049/ipr2.12278
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