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Using the Symptom Patient Similarity Network to Explore the Difference between the Chinese and Western Medicine Pathways of Ischemic Stroke and its Comorbidities
METHODS: Individualized treatment of traditional Chinese medicine (TCM) provides a theoretical basis for the study of the personalized classification of complex diseases. Utilizing the TCM clinical electronic medical records (EMRs) of 7170 in patients with IS, a patient similarity network (PSN) with...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8654542/ https://www.ncbi.nlm.nih.gov/pubmed/34899950 http://dx.doi.org/10.1155/2021/4961738 |
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author | Zhang, Lunzhong Han, Shu Zhao, Manli Zhang, Runshun Zhang, Xuebin Zhang, Jing Liu, Xiaoqing He, Yuyao He, Zhao Dong, Yunfang Hou, Xiaoying Mou, Zijun He, Liyun Zhou, Hong Yang, Jie Huang, Xingyan Hu, Yanjie Zhang, Yuefeng Zhang, Lili Chen, Zhengguang Li, Xiaozhen Tan, Yan Cao, Kegang Meng, Wei Zhong, Liqun |
author_facet | Zhang, Lunzhong Han, Shu Zhao, Manli Zhang, Runshun Zhang, Xuebin Zhang, Jing Liu, Xiaoqing He, Yuyao He, Zhao Dong, Yunfang Hou, Xiaoying Mou, Zijun He, Liyun Zhou, Hong Yang, Jie Huang, Xingyan Hu, Yanjie Zhang, Yuefeng Zhang, Lili Chen, Zhengguang Li, Xiaozhen Tan, Yan Cao, Kegang Meng, Wei Zhong, Liqun |
author_sort | Zhang, Lunzhong |
collection | PubMed |
description | METHODS: Individualized treatment of traditional Chinese medicine (TCM) provides a theoretical basis for the study of the personalized classification of complex diseases. Utilizing the TCM clinical electronic medical records (EMRs) of 7170 in patients with IS, a patient similarity network (PSN) with shared symptoms was constructed. Next, patient subgroups were identified using community detection methods and enrichment analyses were performed. Finally, genetic data of symptoms, herbs, and drugs were used for pathway and GO analysis to explore the characteristics of pathways of subgroups and to compare the similarities and differences in genetic pathways of herbs and drugs from the perspective of molecular pathways of symptoms. RESULTS: We identified 34 patient modules from the PSN, of which 7 modules include 98.48% of the whole cases. The 7 patient subgroups have their own characteristics of risk factors, complications, and comorbidities and the underlying genetic pathways of symptoms, drugs, and herbs. Each subgroup has the largest number of herb pathways. For specific symptom pathways, the number of herb pathways is more than that of drugs. CONCLUSION: The research of disease classification based on community detection of symptom-shared patient networks is practical; the common molecular pathway of symptoms and herbs reflects the rationality of TCM herbs on symptoms and the wide range of therapeutic targets. |
format | Online Article Text |
id | pubmed-8654542 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-86545422021-12-09 Using the Symptom Patient Similarity Network to Explore the Difference between the Chinese and Western Medicine Pathways of Ischemic Stroke and its Comorbidities Zhang, Lunzhong Han, Shu Zhao, Manli Zhang, Runshun Zhang, Xuebin Zhang, Jing Liu, Xiaoqing He, Yuyao He, Zhao Dong, Yunfang Hou, Xiaoying Mou, Zijun He, Liyun Zhou, Hong Yang, Jie Huang, Xingyan Hu, Yanjie Zhang, Yuefeng Zhang, Lili Chen, Zhengguang Li, Xiaozhen Tan, Yan Cao, Kegang Meng, Wei Zhong, Liqun Evid Based Complement Alternat Med Research Article METHODS: Individualized treatment of traditional Chinese medicine (TCM) provides a theoretical basis for the study of the personalized classification of complex diseases. Utilizing the TCM clinical electronic medical records (EMRs) of 7170 in patients with IS, a patient similarity network (PSN) with shared symptoms was constructed. Next, patient subgroups were identified using community detection methods and enrichment analyses were performed. Finally, genetic data of symptoms, herbs, and drugs were used for pathway and GO analysis to explore the characteristics of pathways of subgroups and to compare the similarities and differences in genetic pathways of herbs and drugs from the perspective of molecular pathways of symptoms. RESULTS: We identified 34 patient modules from the PSN, of which 7 modules include 98.48% of the whole cases. The 7 patient subgroups have their own characteristics of risk factors, complications, and comorbidities and the underlying genetic pathways of symptoms, drugs, and herbs. Each subgroup has the largest number of herb pathways. For specific symptom pathways, the number of herb pathways is more than that of drugs. CONCLUSION: The research of disease classification based on community detection of symptom-shared patient networks is practical; the common molecular pathway of symptoms and herbs reflects the rationality of TCM herbs on symptoms and the wide range of therapeutic targets. Hindawi 2021-12-01 /pmc/articles/PMC8654542/ /pubmed/34899950 http://dx.doi.org/10.1155/2021/4961738 Text en Copyright © 2021 Lunzhong Zhang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhang, Lunzhong Han, Shu Zhao, Manli Zhang, Runshun Zhang, Xuebin Zhang, Jing Liu, Xiaoqing He, Yuyao He, Zhao Dong, Yunfang Hou, Xiaoying Mou, Zijun He, Liyun Zhou, Hong Yang, Jie Huang, Xingyan Hu, Yanjie Zhang, Yuefeng Zhang, Lili Chen, Zhengguang Li, Xiaozhen Tan, Yan Cao, Kegang Meng, Wei Zhong, Liqun Using the Symptom Patient Similarity Network to Explore the Difference between the Chinese and Western Medicine Pathways of Ischemic Stroke and its Comorbidities |
title | Using the Symptom Patient Similarity Network to Explore the Difference between the Chinese and Western Medicine Pathways of Ischemic Stroke and its Comorbidities |
title_full | Using the Symptom Patient Similarity Network to Explore the Difference between the Chinese and Western Medicine Pathways of Ischemic Stroke and its Comorbidities |
title_fullStr | Using the Symptom Patient Similarity Network to Explore the Difference between the Chinese and Western Medicine Pathways of Ischemic Stroke and its Comorbidities |
title_full_unstemmed | Using the Symptom Patient Similarity Network to Explore the Difference between the Chinese and Western Medicine Pathways of Ischemic Stroke and its Comorbidities |
title_short | Using the Symptom Patient Similarity Network to Explore the Difference between the Chinese and Western Medicine Pathways of Ischemic Stroke and its Comorbidities |
title_sort | using the symptom patient similarity network to explore the difference between the chinese and western medicine pathways of ischemic stroke and its comorbidities |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8654542/ https://www.ncbi.nlm.nih.gov/pubmed/34899950 http://dx.doi.org/10.1155/2021/4961738 |
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