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Teaching reproducible research for medical students and postgraduate pharmaceutical scientists
In medicine and other academic settings, (doctoral) students often work in interdisciplinary teams together with researchers of pharmaceutical sciences, natural sciences in general, or biostatistics. They should be fundamentally taught good research practices, especially in terms of statistical anal...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656016/ https://www.ncbi.nlm.nih.gov/pubmed/34886890 http://dx.doi.org/10.1186/s13104-021-05862-8 |
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author | Meid, Andreas D. |
author_facet | Meid, Andreas D. |
author_sort | Meid, Andreas D. |
collection | PubMed |
description | In medicine and other academic settings, (doctoral) students often work in interdisciplinary teams together with researchers of pharmaceutical sciences, natural sciences in general, or biostatistics. They should be fundamentally taught good research practices, especially in terms of statistical analysis. This includes reproducibility as a central aspect. Acknowledging that even experienced researchers and supervisors might be unfamiliar with necessary aspects of a perfectly reproducible workflow, a lecture series on reproducible research (RR) was developed for young scientists in clinical pharmacology. The pilot series highlighted definitions of RR, reasons for RR, potential merits of RR, and ways to work accordingly. In trying to actually reproduce a published analysis, several practical obstacles arose. In this article, reproduction of a working example is commented to emphasize the manifold facets of RR, to provide possible explanations for difficulties and solutions, and to argue that harmonized curricula for (quantitative) clinical researchers should include RR principles. These experiences should raise awareness among educators and students, supervisors and young scientists. RR working habits are not only beneficial for ourselves or our students, but also for other researchers within an institution, for scientific partners, for the scientific community, and eventually for the public profiting from research findings. |
format | Online Article Text |
id | pubmed-8656016 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-86560162021-12-10 Teaching reproducible research for medical students and postgraduate pharmaceutical scientists Meid, Andreas D. BMC Res Notes Commentary In medicine and other academic settings, (doctoral) students often work in interdisciplinary teams together with researchers of pharmaceutical sciences, natural sciences in general, or biostatistics. They should be fundamentally taught good research practices, especially in terms of statistical analysis. This includes reproducibility as a central aspect. Acknowledging that even experienced researchers and supervisors might be unfamiliar with necessary aspects of a perfectly reproducible workflow, a lecture series on reproducible research (RR) was developed for young scientists in clinical pharmacology. The pilot series highlighted definitions of RR, reasons for RR, potential merits of RR, and ways to work accordingly. In trying to actually reproduce a published analysis, several practical obstacles arose. In this article, reproduction of a working example is commented to emphasize the manifold facets of RR, to provide possible explanations for difficulties and solutions, and to argue that harmonized curricula for (quantitative) clinical researchers should include RR principles. These experiences should raise awareness among educators and students, supervisors and young scientists. RR working habits are not only beneficial for ourselves or our students, but also for other researchers within an institution, for scientific partners, for the scientific community, and eventually for the public profiting from research findings. BioMed Central 2021-12-09 /pmc/articles/PMC8656016/ /pubmed/34886890 http://dx.doi.org/10.1186/s13104-021-05862-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Commentary Meid, Andreas D. Teaching reproducible research for medical students and postgraduate pharmaceutical scientists |
title | Teaching reproducible research for medical students and postgraduate pharmaceutical scientists |
title_full | Teaching reproducible research for medical students and postgraduate pharmaceutical scientists |
title_fullStr | Teaching reproducible research for medical students and postgraduate pharmaceutical scientists |
title_full_unstemmed | Teaching reproducible research for medical students and postgraduate pharmaceutical scientists |
title_short | Teaching reproducible research for medical students and postgraduate pharmaceutical scientists |
title_sort | teaching reproducible research for medical students and postgraduate pharmaceutical scientists |
topic | Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656016/ https://www.ncbi.nlm.nih.gov/pubmed/34886890 http://dx.doi.org/10.1186/s13104-021-05862-8 |
work_keys_str_mv | AT meidandreasd teachingreproducibleresearchformedicalstudentsandpostgraduatepharmaceuticalscientists |