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Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress

BACKGROUND: LTR retrotransposons play a significant role in plant growth, genome evolution, and environmental stress response, but their regulatory response to heat stress remains unclear. We have investigated the activities of two LTR retrotransposons, PHRE1 and PHRE2, of moso bamboo (Phyllostachys...

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Autores principales: Papolu, Pradeep K., Ramakrishnan, Muthusamy, Wei, Qiang, Vinod, Kunnummal Kurungara, Zou, Long-Hai, Yrjala, Kim, Kalendar, Ruslan, Zhou, Mingbing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656106/
https://www.ncbi.nlm.nih.gov/pubmed/34886797
http://dx.doi.org/10.1186/s12870-021-03339-1
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author Papolu, Pradeep K.
Ramakrishnan, Muthusamy
Wei, Qiang
Vinod, Kunnummal Kurungara
Zou, Long-Hai
Yrjala, Kim
Kalendar, Ruslan
Zhou, Mingbing
author_facet Papolu, Pradeep K.
Ramakrishnan, Muthusamy
Wei, Qiang
Vinod, Kunnummal Kurungara
Zou, Long-Hai
Yrjala, Kim
Kalendar, Ruslan
Zhou, Mingbing
author_sort Papolu, Pradeep K.
collection PubMed
description BACKGROUND: LTR retrotransposons play a significant role in plant growth, genome evolution, and environmental stress response, but their regulatory response to heat stress remains unclear. We have investigated the activities of two LTR retrotransposons, PHRE1 and PHRE2, of moso bamboo (Phyllostachys edulis) in response to heat stress. RESULTS: The differential overexpression of PHRE1 and PHRE2 with or without CaMV35s promoter showed enhanced expression under heat stress in transgenic plants. The transcriptional activity studies showed an increase in transposition activity and copy number among moso bamboo wild type and Arabidopsis transgenic plants under heat stress. Comparison of promoter activity in transgenic plants indicated that 5’LTR promoter activity was higher than CaMV35s promoter. Additionally, yeast one-hybrid (Y1H) system and in planta biomolecular fluorescence complementation (BiFC) assay revealed interactions of heat-dependent transcription factors (TFs) with 5’LTR sequence and direct interactions of TFs with pol and gag. CONCLUSIONS: Our results conclude that the 5’LTR acts as a promoter and could regulate the LTR retrotransposons in moso bamboo under heat stress. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12870-021-03339-1.
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spelling pubmed-86561062021-12-10 Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress Papolu, Pradeep K. Ramakrishnan, Muthusamy Wei, Qiang Vinod, Kunnummal Kurungara Zou, Long-Hai Yrjala, Kim Kalendar, Ruslan Zhou, Mingbing BMC Plant Biol Research BACKGROUND: LTR retrotransposons play a significant role in plant growth, genome evolution, and environmental stress response, but their regulatory response to heat stress remains unclear. We have investigated the activities of two LTR retrotransposons, PHRE1 and PHRE2, of moso bamboo (Phyllostachys edulis) in response to heat stress. RESULTS: The differential overexpression of PHRE1 and PHRE2 with or without CaMV35s promoter showed enhanced expression under heat stress in transgenic plants. The transcriptional activity studies showed an increase in transposition activity and copy number among moso bamboo wild type and Arabidopsis transgenic plants under heat stress. Comparison of promoter activity in transgenic plants indicated that 5’LTR promoter activity was higher than CaMV35s promoter. Additionally, yeast one-hybrid (Y1H) system and in planta biomolecular fluorescence complementation (BiFC) assay revealed interactions of heat-dependent transcription factors (TFs) with 5’LTR sequence and direct interactions of TFs with pol and gag. CONCLUSIONS: Our results conclude that the 5’LTR acts as a promoter and could regulate the LTR retrotransposons in moso bamboo under heat stress. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12870-021-03339-1. BioMed Central 2021-12-09 /pmc/articles/PMC8656106/ /pubmed/34886797 http://dx.doi.org/10.1186/s12870-021-03339-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Papolu, Pradeep K.
Ramakrishnan, Muthusamy
Wei, Qiang
Vinod, Kunnummal Kurungara
Zou, Long-Hai
Yrjala, Kim
Kalendar, Ruslan
Zhou, Mingbing
Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress
title Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress
title_full Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress
title_fullStr Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress
title_full_unstemmed Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress
title_short Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress
title_sort long terminal repeats (ltr) and transcription factors regulate phre1 and phre2 activity in moso bamboo under heat stress
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656106/
https://www.ncbi.nlm.nih.gov/pubmed/34886797
http://dx.doi.org/10.1186/s12870-021-03339-1
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