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Towards an efficient collection and transport of COVID-19 diagnostic specimens using genetic-based algorithms

The speed by which the COVID-19 pandemic spread throughout the world makes the emergency services unprepared to answer all the patients’ requests. The Tunisian ministry of health established a protocol planning the sample collection from the patients at their location. A triage score is first assign...

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Detalles Bibliográficos
Autores principales: Tlili, Takwa, Masri, Hela, Krichen, Saoussen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656180/
https://www.ncbi.nlm.nih.gov/pubmed/34903957
http://dx.doi.org/10.1016/j.asoc.2021.108264
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author Tlili, Takwa
Masri, Hela
Krichen, Saoussen
author_facet Tlili, Takwa
Masri, Hela
Krichen, Saoussen
author_sort Tlili, Takwa
collection PubMed
description The speed by which the COVID-19 pandemic spread throughout the world makes the emergency services unprepared to answer all the patients’ requests. The Tunisian ministry of health established a protocol planning the sample collection from the patients at their location. A triage score is first assigned to each patient according to the symptoms he is showing, and his health conditions. Then, given the limited number of the available ambulances in each area, the location of the patients and the capacity of the nearby hospitals for receiving the testing samples, an ambulance scheduling and routing plan needs to be established so that specimens can be transferred to hospitals in short time. In this paper, we propose to model this problem as a Multi-Origin–Destination Team Orienteering Problem (MODTOP). The objective is to find the optimal one day tour plan for the available ambulances that maximizes the collected scores of visited patients while respecting duration and capacity constraints. To solve this NP-hard problem, two highly effective approaches are proposed which are Hybrid Genetic Algorithm (HGA) and Memetic Algorithm (MA). The HGA combines (i) a k-means construction method for initial population generation and (ii) a one point crossover operator for solution recombination. The MA is an improvement of HGA that integrates an effective local search based on three different neighborhood structures. Computational experiments, supported by a statistical analysis on benchmark data sets, illustrate the efficiency of the proposed approaches. HGA and MA reached the best known solutions in 54.7% and 73.5% of instances, respectively. Likewise, MA reached a relative error of 0.0675% and performed better than four existing approaches. Real-case instances derived from the city of Tunis were also solved and compared with the results of an exact solver Cplex to validate the effectiveness of our algorithm.
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spelling pubmed-86561802021-12-09 Towards an efficient collection and transport of COVID-19 diagnostic specimens using genetic-based algorithms Tlili, Takwa Masri, Hela Krichen, Saoussen Appl Soft Comput Article The speed by which the COVID-19 pandemic spread throughout the world makes the emergency services unprepared to answer all the patients’ requests. The Tunisian ministry of health established a protocol planning the sample collection from the patients at their location. A triage score is first assigned to each patient according to the symptoms he is showing, and his health conditions. Then, given the limited number of the available ambulances in each area, the location of the patients and the capacity of the nearby hospitals for receiving the testing samples, an ambulance scheduling and routing plan needs to be established so that specimens can be transferred to hospitals in short time. In this paper, we propose to model this problem as a Multi-Origin–Destination Team Orienteering Problem (MODTOP). The objective is to find the optimal one day tour plan for the available ambulances that maximizes the collected scores of visited patients while respecting duration and capacity constraints. To solve this NP-hard problem, two highly effective approaches are proposed which are Hybrid Genetic Algorithm (HGA) and Memetic Algorithm (MA). The HGA combines (i) a k-means construction method for initial population generation and (ii) a one point crossover operator for solution recombination. The MA is an improvement of HGA that integrates an effective local search based on three different neighborhood structures. Computational experiments, supported by a statistical analysis on benchmark data sets, illustrate the efficiency of the proposed approaches. HGA and MA reached the best known solutions in 54.7% and 73.5% of instances, respectively. Likewise, MA reached a relative error of 0.0675% and performed better than four existing approaches. Real-case instances derived from the city of Tunis were also solved and compared with the results of an exact solver Cplex to validate the effectiveness of our algorithm. Elsevier B.V. 2022-02 2021-12-09 /pmc/articles/PMC8656180/ /pubmed/34903957 http://dx.doi.org/10.1016/j.asoc.2021.108264 Text en © 2021 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Tlili, Takwa
Masri, Hela
Krichen, Saoussen
Towards an efficient collection and transport of COVID-19 diagnostic specimens using genetic-based algorithms
title Towards an efficient collection and transport of COVID-19 diagnostic specimens using genetic-based algorithms
title_full Towards an efficient collection and transport of COVID-19 diagnostic specimens using genetic-based algorithms
title_fullStr Towards an efficient collection and transport of COVID-19 diagnostic specimens using genetic-based algorithms
title_full_unstemmed Towards an efficient collection and transport of COVID-19 diagnostic specimens using genetic-based algorithms
title_short Towards an efficient collection and transport of COVID-19 diagnostic specimens using genetic-based algorithms
title_sort towards an efficient collection and transport of covid-19 diagnostic specimens using genetic-based algorithms
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656180/
https://www.ncbi.nlm.nih.gov/pubmed/34903957
http://dx.doi.org/10.1016/j.asoc.2021.108264
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