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Bacterial Diversity and CAZyme Potential Revealed in Pandanus Rich Thermal Spring Cluster of India: A Non-cultivable 16S rRNA Sequencing Approach

In the present study, we explored four different geothermal spots of the Deulajhari spring cluster at a proximity of 10–20 meters with temperatures of 43 to 65°C to unravel their genesis, bacterial diversity and CAZyme potential. However, minor variations in physicochemical properties; TOC, sodium,...

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Autores principales: Dixit, Sangita, Gaur, Mahendra, Subudhi, Enketeswara, Sahoo, Rajesh Kumar, Dey, Suchanda, Mahapatra, Lakshmi Datta, Mandal, Surajit De, Senthil Kumar, Nachimuthu, Anirudh, Hardik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656282/
https://www.ncbi.nlm.nih.gov/pubmed/34899644
http://dx.doi.org/10.3389/fmicb.2021.760573
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author Dixit, Sangita
Gaur, Mahendra
Subudhi, Enketeswara
Sahoo, Rajesh Kumar
Dey, Suchanda
Mahapatra, Lakshmi Datta
Mandal, Surajit De
Senthil Kumar, Nachimuthu
Anirudh, Hardik
author_facet Dixit, Sangita
Gaur, Mahendra
Subudhi, Enketeswara
Sahoo, Rajesh Kumar
Dey, Suchanda
Mahapatra, Lakshmi Datta
Mandal, Surajit De
Senthil Kumar, Nachimuthu
Anirudh, Hardik
author_sort Dixit, Sangita
collection PubMed
description In the present study, we explored four different geothermal spots of the Deulajhari spring cluster at a proximity of 10–20 meters with temperatures of 43 to 65°C to unravel their genesis, bacterial diversity and CAZyme potential. However, minor variations in physicochemical properties; TOC, sodium, chloride, zinc and nitrate were observed, including the pH of the spring openings. Illumina based amplicon sequencing revealed Firmicutes, Proteobacteria and Chloroflexi as the major bacterial phylum with higher abundance in the DJ04 sample. The alpha diversity of all the springs was almost same, whereas beta diversity revealed variations in the degree of uniqueness of OTUs at different temperatures. Statistical analysis established a positive correlation between sulfur content with Heliobacterium, Thermodesulfovibrio, Thermodesulfobacterium and Herpetosipho as well as TOC and HCO(3) with Thermoanaerobacter, Desulfovibrio, Candidatus solibacter and Dehalogenimona. The major hydrocarbon family genes and Carbohydrate Active Enzyme pathways were predicted to be highest in DJ04 with elevated concentrations of HCO(3) and TOC. Higher homogeneity in geo-physicochemical and microbial features direct the possibility of the common origin of these springs through plumbing systems. However, the minor variations in diversity and functionality were due to variations in temperature in spring openings through the mixing of subsurface water contaminated with carbohydrates from leaf biomass litter. Functional characterization of the thermophilic bacteria of this spring provides essential scope for further industrial applications. The biogeochemical reasons hypothesized for the genesis of unique multiple openings in the cluster are also of interest to conservation scientists for taking measures toward necessary laws and regulations to protect and preserve these springs.
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spelling pubmed-86562822021-12-10 Bacterial Diversity and CAZyme Potential Revealed in Pandanus Rich Thermal Spring Cluster of India: A Non-cultivable 16S rRNA Sequencing Approach Dixit, Sangita Gaur, Mahendra Subudhi, Enketeswara Sahoo, Rajesh Kumar Dey, Suchanda Mahapatra, Lakshmi Datta Mandal, Surajit De Senthil Kumar, Nachimuthu Anirudh, Hardik Front Microbiol Microbiology In the present study, we explored four different geothermal spots of the Deulajhari spring cluster at a proximity of 10–20 meters with temperatures of 43 to 65°C to unravel their genesis, bacterial diversity and CAZyme potential. However, minor variations in physicochemical properties; TOC, sodium, chloride, zinc and nitrate were observed, including the pH of the spring openings. Illumina based amplicon sequencing revealed Firmicutes, Proteobacteria and Chloroflexi as the major bacterial phylum with higher abundance in the DJ04 sample. The alpha diversity of all the springs was almost same, whereas beta diversity revealed variations in the degree of uniqueness of OTUs at different temperatures. Statistical analysis established a positive correlation between sulfur content with Heliobacterium, Thermodesulfovibrio, Thermodesulfobacterium and Herpetosipho as well as TOC and HCO(3) with Thermoanaerobacter, Desulfovibrio, Candidatus solibacter and Dehalogenimona. The major hydrocarbon family genes and Carbohydrate Active Enzyme pathways were predicted to be highest in DJ04 with elevated concentrations of HCO(3) and TOC. Higher homogeneity in geo-physicochemical and microbial features direct the possibility of the common origin of these springs through plumbing systems. However, the minor variations in diversity and functionality were due to variations in temperature in spring openings through the mixing of subsurface water contaminated with carbohydrates from leaf biomass litter. Functional characterization of the thermophilic bacteria of this spring provides essential scope for further industrial applications. The biogeochemical reasons hypothesized for the genesis of unique multiple openings in the cluster are also of interest to conservation scientists for taking measures toward necessary laws and regulations to protect and preserve these springs. Frontiers Media S.A. 2021-11-25 /pmc/articles/PMC8656282/ /pubmed/34899644 http://dx.doi.org/10.3389/fmicb.2021.760573 Text en Copyright © 2021 Dixit, Gaur, Subudhi, Sahoo, Dey, Mahapatra, Mandal, Senthil Kumar and Anirudh. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Dixit, Sangita
Gaur, Mahendra
Subudhi, Enketeswara
Sahoo, Rajesh Kumar
Dey, Suchanda
Mahapatra, Lakshmi Datta
Mandal, Surajit De
Senthil Kumar, Nachimuthu
Anirudh, Hardik
Bacterial Diversity and CAZyme Potential Revealed in Pandanus Rich Thermal Spring Cluster of India: A Non-cultivable 16S rRNA Sequencing Approach
title Bacterial Diversity and CAZyme Potential Revealed in Pandanus Rich Thermal Spring Cluster of India: A Non-cultivable 16S rRNA Sequencing Approach
title_full Bacterial Diversity and CAZyme Potential Revealed in Pandanus Rich Thermal Spring Cluster of India: A Non-cultivable 16S rRNA Sequencing Approach
title_fullStr Bacterial Diversity and CAZyme Potential Revealed in Pandanus Rich Thermal Spring Cluster of India: A Non-cultivable 16S rRNA Sequencing Approach
title_full_unstemmed Bacterial Diversity and CAZyme Potential Revealed in Pandanus Rich Thermal Spring Cluster of India: A Non-cultivable 16S rRNA Sequencing Approach
title_short Bacterial Diversity and CAZyme Potential Revealed in Pandanus Rich Thermal Spring Cluster of India: A Non-cultivable 16S rRNA Sequencing Approach
title_sort bacterial diversity and cazyme potential revealed in pandanus rich thermal spring cluster of india: a non-cultivable 16s rrna sequencing approach
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656282/
https://www.ncbi.nlm.nih.gov/pubmed/34899644
http://dx.doi.org/10.3389/fmicb.2021.760573
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