SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh

Genomic sequences from a complete SARS-CoV-2 open reading frame (ORF) were obtained from 24 patients diagnosed in May 2020 in Dhaka, Bangladesh. All sequences belonged to clade 20A or 20B, and none were variants of concern. Interestingly, one sequence showed a 161-nucleotide deletion in ORF7a.

Detalles Bibliográficos
Autores principales: Rahman, Mizanur, Rahim, Rummana, Hasan, Abu, Kawai, Naoko, Moonga, Lavel Chinyama, Sugi, Tatsuki, Hayashida, Kyoko, Yamagishi, Junya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656380/
https://www.ncbi.nlm.nih.gov/pubmed/34881982
http://dx.doi.org/10.1128/MRA.00764-21
_version_ 1784612268320751616
author Rahman, Mizanur
Rahim, Rummana
Hasan, Abu
Kawai, Naoko
Moonga, Lavel Chinyama
Sugi, Tatsuki
Hayashida, Kyoko
Yamagishi, Junya
author_facet Rahman, Mizanur
Rahim, Rummana
Hasan, Abu
Kawai, Naoko
Moonga, Lavel Chinyama
Sugi, Tatsuki
Hayashida, Kyoko
Yamagishi, Junya
author_sort Rahman, Mizanur
collection PubMed
description Genomic sequences from a complete SARS-CoV-2 open reading frame (ORF) were obtained from 24 patients diagnosed in May 2020 in Dhaka, Bangladesh. All sequences belonged to clade 20A or 20B, and none were variants of concern. Interestingly, one sequence showed a 161-nucleotide deletion in ORF7a.
format Online
Article
Text
id pubmed-8656380
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-86563802021-12-27 SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh Rahman, Mizanur Rahim, Rummana Hasan, Abu Kawai, Naoko Moonga, Lavel Chinyama Sugi, Tatsuki Hayashida, Kyoko Yamagishi, Junya Microbiol Resour Announc Genome Sequences Genomic sequences from a complete SARS-CoV-2 open reading frame (ORF) were obtained from 24 patients diagnosed in May 2020 in Dhaka, Bangladesh. All sequences belonged to clade 20A or 20B, and none were variants of concern. Interestingly, one sequence showed a 161-nucleotide deletion in ORF7a. American Society for Microbiology 2021-12-09 /pmc/articles/PMC8656380/ /pubmed/34881982 http://dx.doi.org/10.1128/MRA.00764-21 Text en Copyright © 2021 Rahman et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Rahman, Mizanur
Rahim, Rummana
Hasan, Abu
Kawai, Naoko
Moonga, Lavel Chinyama
Sugi, Tatsuki
Hayashida, Kyoko
Yamagishi, Junya
SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh
title SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh
title_full SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh
title_fullStr SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh
title_full_unstemmed SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh
title_short SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh
title_sort sars-cov-2 genome sequences, including one with an orf7a deletion, obtained from patients in bangladesh
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656380/
https://www.ncbi.nlm.nih.gov/pubmed/34881982
http://dx.doi.org/10.1128/MRA.00764-21
work_keys_str_mv AT rahmanmizanur sarscov2genomesequencesincludingonewithanorf7adeletionobtainedfrompatientsinbangladesh
AT rahimrummana sarscov2genomesequencesincludingonewithanorf7adeletionobtainedfrompatientsinbangladesh
AT hasanabu sarscov2genomesequencesincludingonewithanorf7adeletionobtainedfrompatientsinbangladesh
AT kawainaoko sarscov2genomesequencesincludingonewithanorf7adeletionobtainedfrompatientsinbangladesh
AT moongalavelchinyama sarscov2genomesequencesincludingonewithanorf7adeletionobtainedfrompatientsinbangladesh
AT sugitatsuki sarscov2genomesequencesincludingonewithanorf7adeletionobtainedfrompatientsinbangladesh
AT hayashidakyoko sarscov2genomesequencesincludingonewithanorf7adeletionobtainedfrompatientsinbangladesh
AT yamagishijunya sarscov2genomesequencesincludingonewithanorf7adeletionobtainedfrompatientsinbangladesh

Ejemplares similares