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Performance Evaluation for Repair of HSGc-C5 Carcinoma Cell Using Geant4-DNA
SIMPLE SUMMARY: To evaluate the repair performance of HSGc-C5 carcinoma cell against radiation-induced DNA damage, a Geant4-DNA application for radiobiological research was extended by using newly measured experimental data acquired in this study. Concerning fast- and slow-DNA rejoining, the two-les...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656964/ https://www.ncbi.nlm.nih.gov/pubmed/34885155 http://dx.doi.org/10.3390/cancers13236046 |
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author | Sakata, Dousatsu Suzuki, Masao Hirayama, Ryoichi Abe, Yasushi Muramatsu, Masayuki Sato, Shinji Belov, Oleg Kyriakou, Ioanna Emfietzoglou, Dimitris Guatelli, Susanna Incerti, Sebastien Inaniwa, Taku |
author_facet | Sakata, Dousatsu Suzuki, Masao Hirayama, Ryoichi Abe, Yasushi Muramatsu, Masayuki Sato, Shinji Belov, Oleg Kyriakou, Ioanna Emfietzoglou, Dimitris Guatelli, Susanna Incerti, Sebastien Inaniwa, Taku |
author_sort | Sakata, Dousatsu |
collection | PubMed |
description | SIMPLE SUMMARY: To evaluate the repair performance of HSGc-C5 carcinoma cell against radiation-induced DNA damage, a Geant4-DNA application for radiobiological research was extended by using newly measured experimental data acquired in this study. Concerning fast- and slow-DNA rejoining, the two-lesion kinetics (TLK) model parameters were adequately optimized (the repair speeds of each process were reasonably close to the DNA rejoining speed of the nonhomologous end-joining and homologous recombination pathways). The lethality probabilities of the DNA damage induced by complex double strand breaks (DSBs) and binary repair were approximately [Formula: see text] and [Formula: see text] , respectively. Using the optimized repair parameters, the Geant4-DNA simulation was able to predict the cell surviving fraction (SF) and the DNA repair kinetics. ABSTRACT: Track-structure Monte Carlo simulations are useful tools to evaluate initial DNA damage induced by irradiation. In the previous study, we have developed a Gean4-DNA-based application to estimate the cell surviving fraction of V79 cells after irradiation, bridging the gap between the initial DNA damage and the DNA rejoining kinetics by means of the two-lesion kinetics (TLK) model. However, since the DNA repair performance depends on cell line, the same model parameters cannot be used for different cell lines. Thus, we extended the Geant4-DNA application with a TLK model for the evaluation of DNA damage repair performance in HSGc-C5 carcinoma cells which are typically used for evaluating proton/carbon radiation treatment effects. For this evaluation, we also performed experimental measurements for cell surviving fractions and DNA rejoining kinetics of the HSGc-C5 cells irradiated by 70 MeV protons at the cyclotron facility at the National Institutes for Quantum and Radiological Science and Technology (QST). Concerning fast- and slow-DNA rejoining, the TLK model parameters were adequately optimized with the simulated initial DNA damage. The optimized DNA rejoining speeds were reasonably agreed with the experimental DNA rejoining speeds. Using the optimized TLK model, the Geant4-DNA simulation is now able to predict cell survival and DNA-rejoining kinetics for HSGc-C5 cells. |
format | Online Article Text |
id | pubmed-8656964 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-86569642021-12-10 Performance Evaluation for Repair of HSGc-C5 Carcinoma Cell Using Geant4-DNA Sakata, Dousatsu Suzuki, Masao Hirayama, Ryoichi Abe, Yasushi Muramatsu, Masayuki Sato, Shinji Belov, Oleg Kyriakou, Ioanna Emfietzoglou, Dimitris Guatelli, Susanna Incerti, Sebastien Inaniwa, Taku Cancers (Basel) Article SIMPLE SUMMARY: To evaluate the repair performance of HSGc-C5 carcinoma cell against radiation-induced DNA damage, a Geant4-DNA application for radiobiological research was extended by using newly measured experimental data acquired in this study. Concerning fast- and slow-DNA rejoining, the two-lesion kinetics (TLK) model parameters were adequately optimized (the repair speeds of each process were reasonably close to the DNA rejoining speed of the nonhomologous end-joining and homologous recombination pathways). The lethality probabilities of the DNA damage induced by complex double strand breaks (DSBs) and binary repair were approximately [Formula: see text] and [Formula: see text] , respectively. Using the optimized repair parameters, the Geant4-DNA simulation was able to predict the cell surviving fraction (SF) and the DNA repair kinetics. ABSTRACT: Track-structure Monte Carlo simulations are useful tools to evaluate initial DNA damage induced by irradiation. In the previous study, we have developed a Gean4-DNA-based application to estimate the cell surviving fraction of V79 cells after irradiation, bridging the gap between the initial DNA damage and the DNA rejoining kinetics by means of the two-lesion kinetics (TLK) model. However, since the DNA repair performance depends on cell line, the same model parameters cannot be used for different cell lines. Thus, we extended the Geant4-DNA application with a TLK model for the evaluation of DNA damage repair performance in HSGc-C5 carcinoma cells which are typically used for evaluating proton/carbon radiation treatment effects. For this evaluation, we also performed experimental measurements for cell surviving fractions and DNA rejoining kinetics of the HSGc-C5 cells irradiated by 70 MeV protons at the cyclotron facility at the National Institutes for Quantum and Radiological Science and Technology (QST). Concerning fast- and slow-DNA rejoining, the TLK model parameters were adequately optimized with the simulated initial DNA damage. The optimized DNA rejoining speeds were reasonably agreed with the experimental DNA rejoining speeds. Using the optimized TLK model, the Geant4-DNA simulation is now able to predict cell survival and DNA-rejoining kinetics for HSGc-C5 cells. MDPI 2021-11-30 /pmc/articles/PMC8656964/ /pubmed/34885155 http://dx.doi.org/10.3390/cancers13236046 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Sakata, Dousatsu Suzuki, Masao Hirayama, Ryoichi Abe, Yasushi Muramatsu, Masayuki Sato, Shinji Belov, Oleg Kyriakou, Ioanna Emfietzoglou, Dimitris Guatelli, Susanna Incerti, Sebastien Inaniwa, Taku Performance Evaluation for Repair of HSGc-C5 Carcinoma Cell Using Geant4-DNA |
title | Performance Evaluation for Repair of HSGc-C5 Carcinoma Cell Using Geant4-DNA |
title_full | Performance Evaluation for Repair of HSGc-C5 Carcinoma Cell Using Geant4-DNA |
title_fullStr | Performance Evaluation for Repair of HSGc-C5 Carcinoma Cell Using Geant4-DNA |
title_full_unstemmed | Performance Evaluation for Repair of HSGc-C5 Carcinoma Cell Using Geant4-DNA |
title_short | Performance Evaluation for Repair of HSGc-C5 Carcinoma Cell Using Geant4-DNA |
title_sort | performance evaluation for repair of hsgc-c5 carcinoma cell using geant4-dna |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8656964/ https://www.ncbi.nlm.nih.gov/pubmed/34885155 http://dx.doi.org/10.3390/cancers13236046 |
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