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Rapid Analysis of Visual Receptive Fields by Iterative Tomography
Many receptive fields in the early visual system show standard (center-surround) structure and can be analyzed using simple drifting patterns and a difference-of-Gaussians (DoG) model, which treats the receptive field as a linear filter of the visual image. But many other receptive fields show nonli...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society for Neuroscience
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8658541/ https://www.ncbi.nlm.nih.gov/pubmed/34799410 http://dx.doi.org/10.1523/ENEURO.0046-21.2021 |
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author | Eiber, Calvin D. Huang, Jin Y. Chen, Spencer C. Zeater, Natalie Pietersen, Alexander N. J. Protti, Dario A. Martin, Paul R. |
author_facet | Eiber, Calvin D. Huang, Jin Y. Chen, Spencer C. Zeater, Natalie Pietersen, Alexander N. J. Protti, Dario A. Martin, Paul R. |
author_sort | Eiber, Calvin D. |
collection | PubMed |
description | Many receptive fields in the early visual system show standard (center-surround) structure and can be analyzed using simple drifting patterns and a difference-of-Gaussians (DoG) model, which treats the receptive field as a linear filter of the visual image. But many other receptive fields show nonlinear properties such as selectivity for direction of movement. Such receptive fields are typically studied using discrete stimuli (moving or flashed bars and edges) and are modelled according to the features of the visual image to which they are most sensitive. Here, we harness recent advances in tomographic image analysis to characterize rapidly and simultaneously both the linear and nonlinear components of visual receptive fields. Spiking and intracellular voltage potential responses to briefly flashed bars are analyzed using non-negative matrix factorization (NNMF) and iterative reconstruction tomography (IRT). The method yields high-resolution receptive field maps of individual neurons and neuron ensembles in primate (marmoset, both sexes) lateral geniculate and rodent (mouse, male) retina. We show that the first two IRT components correspond to DoG-equivalent center and surround of standard [magnocellular (M) and parvocellular (P)] receptive fields in primate geniculate. The first two IRT components also reveal the spatiotemporal receptive field structure of nonstandard (on/off-rectifying) receptive fields. In rodent retina we combine NNMF-IRT with patch-clamp recording and dye injection to directly map spatial receptive fields to the underlying anatomy of retinal output neurons. We conclude that NNMF-IRT provides a rapid and flexible framework for study of receptive fields in the early visual system. |
format | Online Article Text |
id | pubmed-8658541 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Society for Neuroscience |
record_format | MEDLINE/PubMed |
spelling | pubmed-86585412021-12-10 Rapid Analysis of Visual Receptive Fields by Iterative Tomography Eiber, Calvin D. Huang, Jin Y. Chen, Spencer C. Zeater, Natalie Pietersen, Alexander N. J. Protti, Dario A. Martin, Paul R. eNeuro Research Article: Confirmation Many receptive fields in the early visual system show standard (center-surround) structure and can be analyzed using simple drifting patterns and a difference-of-Gaussians (DoG) model, which treats the receptive field as a linear filter of the visual image. But many other receptive fields show nonlinear properties such as selectivity for direction of movement. Such receptive fields are typically studied using discrete stimuli (moving or flashed bars and edges) and are modelled according to the features of the visual image to which they are most sensitive. Here, we harness recent advances in tomographic image analysis to characterize rapidly and simultaneously both the linear and nonlinear components of visual receptive fields. Spiking and intracellular voltage potential responses to briefly flashed bars are analyzed using non-negative matrix factorization (NNMF) and iterative reconstruction tomography (IRT). The method yields high-resolution receptive field maps of individual neurons and neuron ensembles in primate (marmoset, both sexes) lateral geniculate and rodent (mouse, male) retina. We show that the first two IRT components correspond to DoG-equivalent center and surround of standard [magnocellular (M) and parvocellular (P)] receptive fields in primate geniculate. The first two IRT components also reveal the spatiotemporal receptive field structure of nonstandard (on/off-rectifying) receptive fields. In rodent retina we combine NNMF-IRT with patch-clamp recording and dye injection to directly map spatial receptive fields to the underlying anatomy of retinal output neurons. We conclude that NNMF-IRT provides a rapid and flexible framework for study of receptive fields in the early visual system. Society for Neuroscience 2021-12-07 /pmc/articles/PMC8658541/ /pubmed/34799410 http://dx.doi.org/10.1523/ENEURO.0046-21.2021 Text en Copyright © 2021 Eiber et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed. |
spellingShingle | Research Article: Confirmation Eiber, Calvin D. Huang, Jin Y. Chen, Spencer C. Zeater, Natalie Pietersen, Alexander N. J. Protti, Dario A. Martin, Paul R. Rapid Analysis of Visual Receptive Fields by Iterative Tomography |
title | Rapid Analysis of Visual Receptive Fields by Iterative Tomography |
title_full | Rapid Analysis of Visual Receptive Fields by Iterative Tomography |
title_fullStr | Rapid Analysis of Visual Receptive Fields by Iterative Tomography |
title_full_unstemmed | Rapid Analysis of Visual Receptive Fields by Iterative Tomography |
title_short | Rapid Analysis of Visual Receptive Fields by Iterative Tomography |
title_sort | rapid analysis of visual receptive fields by iterative tomography |
topic | Research Article: Confirmation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8658541/ https://www.ncbi.nlm.nih.gov/pubmed/34799410 http://dx.doi.org/10.1523/ENEURO.0046-21.2021 |
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