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Transcriptome Analysis of Jujube (Ziziphus jujuba Mill.) Response to Heat Stress
Heat stress (HS) is a common stress influencing the growth and reproduction of plant species. Jujube (Ziziphus jujuba Mill.) is an economically important tree with strong abiotic stress resistance, but the molecular mechanism of its response to HS remains elusive. In this study, we subjected seedlin...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660251/ https://www.ncbi.nlm.nih.gov/pubmed/34901262 http://dx.doi.org/10.1155/2021/3442277 |
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author | Yang, Lei Jin, Juan Fan, Dingyu Hao, Qing Niu, Jianxin |
author_facet | Yang, Lei Jin, Juan Fan, Dingyu Hao, Qing Niu, Jianxin |
author_sort | Yang, Lei |
collection | PubMed |
description | Heat stress (HS) is a common stress influencing the growth and reproduction of plant species. Jujube (Ziziphus jujuba Mill.) is an economically important tree with strong abiotic stress resistance, but the molecular mechanism of its response to HS remains elusive. In this study, we subjected seedlings of Z. jujuba cultivar “Hqing1-HR” to HS (45°C) for 0, 1, 3, 5, and 7 days, respectively, and collected the leaf samples (HR0, HR1, HR3, HR5, and HR7) accordingly. Fifteen cDNA libraries from leaves were constructed for transcriptomics assays. RNA sequencing and transcriptomics identified 1,642, 4,080, 5,160, and 2,119 differentially expressed genes (DEGs) in comparisons of HR1 vs. HR0, HR3 vs. HR0, HR5 vs. HR0, and HR7 vs. HR0, respectively. Gene ontology analyses of the DEGs from these comparisons revealed enrichment in a series of biological processes involved in stress responses, photosynthesis, and metabolism, suggesting that lowering or upregulating expression of these genes might play important roles in the response to HS. This study contributed to our understanding of the molecular mechanism of jujube response to HS and will be beneficial for developing jujube cultivars with improved heat resistance. |
format | Online Article Text |
id | pubmed-8660251 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-86602512021-12-10 Transcriptome Analysis of Jujube (Ziziphus jujuba Mill.) Response to Heat Stress Yang, Lei Jin, Juan Fan, Dingyu Hao, Qing Niu, Jianxin Int J Genomics Research Article Heat stress (HS) is a common stress influencing the growth and reproduction of plant species. Jujube (Ziziphus jujuba Mill.) is an economically important tree with strong abiotic stress resistance, but the molecular mechanism of its response to HS remains elusive. In this study, we subjected seedlings of Z. jujuba cultivar “Hqing1-HR” to HS (45°C) for 0, 1, 3, 5, and 7 days, respectively, and collected the leaf samples (HR0, HR1, HR3, HR5, and HR7) accordingly. Fifteen cDNA libraries from leaves were constructed for transcriptomics assays. RNA sequencing and transcriptomics identified 1,642, 4,080, 5,160, and 2,119 differentially expressed genes (DEGs) in comparisons of HR1 vs. HR0, HR3 vs. HR0, HR5 vs. HR0, and HR7 vs. HR0, respectively. Gene ontology analyses of the DEGs from these comparisons revealed enrichment in a series of biological processes involved in stress responses, photosynthesis, and metabolism, suggesting that lowering or upregulating expression of these genes might play important roles in the response to HS. This study contributed to our understanding of the molecular mechanism of jujube response to HS and will be beneficial for developing jujube cultivars with improved heat resistance. Hindawi 2021-12-02 /pmc/articles/PMC8660251/ /pubmed/34901262 http://dx.doi.org/10.1155/2021/3442277 Text en Copyright © 2021 Lei Yang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Yang, Lei Jin, Juan Fan, Dingyu Hao, Qing Niu, Jianxin Transcriptome Analysis of Jujube (Ziziphus jujuba Mill.) Response to Heat Stress |
title | Transcriptome Analysis of Jujube (Ziziphus jujuba Mill.) Response to Heat Stress |
title_full | Transcriptome Analysis of Jujube (Ziziphus jujuba Mill.) Response to Heat Stress |
title_fullStr | Transcriptome Analysis of Jujube (Ziziphus jujuba Mill.) Response to Heat Stress |
title_full_unstemmed | Transcriptome Analysis of Jujube (Ziziphus jujuba Mill.) Response to Heat Stress |
title_short | Transcriptome Analysis of Jujube (Ziziphus jujuba Mill.) Response to Heat Stress |
title_sort | transcriptome analysis of jujube (ziziphus jujuba mill.) response to heat stress |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660251/ https://www.ncbi.nlm.nih.gov/pubmed/34901262 http://dx.doi.org/10.1155/2021/3442277 |
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