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Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer
Background: Tumor purity plays a vital role in the biological process of solid tumors, but its function in gynecologic cancers remains unclear. This study explored the correlation between tumor purity and immune function of gynecological cancers and its reliability as a prognostic indicator of immun...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660621/ https://www.ncbi.nlm.nih.gov/pubmed/34844217 http://dx.doi.org/10.18632/aging.203714 |
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author | Deng, Yali Song, Zewen Huang, Li Guo, Zhenni Tong, Binghua Sun, Meiqing Zhao, Jin Zhang, Huina Zhang, Zhen Li, Guoyin |
author_facet | Deng, Yali Song, Zewen Huang, Li Guo, Zhenni Tong, Binghua Sun, Meiqing Zhao, Jin Zhang, Huina Zhang, Zhen Li, Guoyin |
author_sort | Deng, Yali |
collection | PubMed |
description | Background: Tumor purity plays a vital role in the biological process of solid tumors, but its function in gynecologic cancers remains unclear. This study explored the correlation between tumor purity and immune function of gynecological cancers and its reliability as a prognostic indicator of immunotherapy. Methods: Gynecological cancer-related datasets were downloaded from The Cancer Genome Atlas (TCGA). Tumor purity was calculated by the ESTIMATE algorithm. A LASSO Cox regression analysis was performed to construct the risk score model. A Kaplan–Meier Plotter was used to explore the relationships between tumor purity and cancer prognosis. We performed the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Set Enrichment Analysis (GSEA) to explore the pathways in the subgroups. A nomogram was used to quantitatively assess the cancer prognosis. Results: Tumor purity was negatively correlated with B cell infiltration in cervical squamous cell carcinoma and endocervical adenocarcinoma (CESC). Approximately 420 genes were positively associated with B cell infiltration and CESC prognosis and were enriched in immune-related signaling pathways. There were 11 key genes used to construct a risk score model. The low-risk group had a higher immune score and better prognosis than the high-risk group. A nomogram based on risk score, T stage, and clinical-stage had good predictive value in quantitatively evaluating CESC prognosis. Conclusions: This study is the first to reveal the correlation between tumor purity and immunity in CESC and suggests that low-risk patients may be more sensitive to immunotherapy. This provides a theoretical basis for the clinical treatment of CESC. |
format | Online Article Text |
id | pubmed-8660621 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-86606212021-12-13 Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer Deng, Yali Song, Zewen Huang, Li Guo, Zhenni Tong, Binghua Sun, Meiqing Zhao, Jin Zhang, Huina Zhang, Zhen Li, Guoyin Aging (Albany NY) Research Paper Background: Tumor purity plays a vital role in the biological process of solid tumors, but its function in gynecologic cancers remains unclear. This study explored the correlation between tumor purity and immune function of gynecological cancers and its reliability as a prognostic indicator of immunotherapy. Methods: Gynecological cancer-related datasets were downloaded from The Cancer Genome Atlas (TCGA). Tumor purity was calculated by the ESTIMATE algorithm. A LASSO Cox regression analysis was performed to construct the risk score model. A Kaplan–Meier Plotter was used to explore the relationships between tumor purity and cancer prognosis. We performed the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Set Enrichment Analysis (GSEA) to explore the pathways in the subgroups. A nomogram was used to quantitatively assess the cancer prognosis. Results: Tumor purity was negatively correlated with B cell infiltration in cervical squamous cell carcinoma and endocervical adenocarcinoma (CESC). Approximately 420 genes were positively associated with B cell infiltration and CESC prognosis and were enriched in immune-related signaling pathways. There were 11 key genes used to construct a risk score model. The low-risk group had a higher immune score and better prognosis than the high-risk group. A nomogram based on risk score, T stage, and clinical-stage had good predictive value in quantitatively evaluating CESC prognosis. Conclusions: This study is the first to reveal the correlation between tumor purity and immunity in CESC and suggests that low-risk patients may be more sensitive to immunotherapy. This provides a theoretical basis for the clinical treatment of CESC. Impact Journals 2021-11-29 /pmc/articles/PMC8660621/ /pubmed/34844217 http://dx.doi.org/10.18632/aging.203714 Text en Copyright: © 2021 Deng et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Deng, Yali Song, Zewen Huang, Li Guo, Zhenni Tong, Binghua Sun, Meiqing Zhao, Jin Zhang, Huina Zhang, Zhen Li, Guoyin Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer |
title | Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer |
title_full | Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer |
title_fullStr | Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer |
title_full_unstemmed | Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer |
title_short | Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer |
title_sort | tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660621/ https://www.ncbi.nlm.nih.gov/pubmed/34844217 http://dx.doi.org/10.18632/aging.203714 |
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