Cargando…

Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer

Background: Tumor purity plays a vital role in the biological process of solid tumors, but its function in gynecologic cancers remains unclear. This study explored the correlation between tumor purity and immune function of gynecological cancers and its reliability as a prognostic indicator of immun...

Descripción completa

Detalles Bibliográficos
Autores principales: Deng, Yali, Song, Zewen, Huang, Li, Guo, Zhenni, Tong, Binghua, Sun, Meiqing, Zhao, Jin, Zhang, Huina, Zhang, Zhen, Li, Guoyin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660621/
https://www.ncbi.nlm.nih.gov/pubmed/34844217
http://dx.doi.org/10.18632/aging.203714
_version_ 1784613227053711360
author Deng, Yali
Song, Zewen
Huang, Li
Guo, Zhenni
Tong, Binghua
Sun, Meiqing
Zhao, Jin
Zhang, Huina
Zhang, Zhen
Li, Guoyin
author_facet Deng, Yali
Song, Zewen
Huang, Li
Guo, Zhenni
Tong, Binghua
Sun, Meiqing
Zhao, Jin
Zhang, Huina
Zhang, Zhen
Li, Guoyin
author_sort Deng, Yali
collection PubMed
description Background: Tumor purity plays a vital role in the biological process of solid tumors, but its function in gynecologic cancers remains unclear. This study explored the correlation between tumor purity and immune function of gynecological cancers and its reliability as a prognostic indicator of immunotherapy. Methods: Gynecological cancer-related datasets were downloaded from The Cancer Genome Atlas (TCGA). Tumor purity was calculated by the ESTIMATE algorithm. A LASSO Cox regression analysis was performed to construct the risk score model. A Kaplan–Meier Plotter was used to explore the relationships between tumor purity and cancer prognosis. We performed the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Set Enrichment Analysis (GSEA) to explore the pathways in the subgroups. A nomogram was used to quantitatively assess the cancer prognosis. Results: Tumor purity was negatively correlated with B cell infiltration in cervical squamous cell carcinoma and endocervical adenocarcinoma (CESC). Approximately 420 genes were positively associated with B cell infiltration and CESC prognosis and were enriched in immune-related signaling pathways. There were 11 key genes used to construct a risk score model. The low-risk group had a higher immune score and better prognosis than the high-risk group. A nomogram based on risk score, T stage, and clinical-stage had good predictive value in quantitatively evaluating CESC prognosis. Conclusions: This study is the first to reveal the correlation between tumor purity and immunity in CESC and suggests that low-risk patients may be more sensitive to immunotherapy. This provides a theoretical basis for the clinical treatment of CESC.
format Online
Article
Text
id pubmed-8660621
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Impact Journals
record_format MEDLINE/PubMed
spelling pubmed-86606212021-12-13 Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer Deng, Yali Song, Zewen Huang, Li Guo, Zhenni Tong, Binghua Sun, Meiqing Zhao, Jin Zhang, Huina Zhang, Zhen Li, Guoyin Aging (Albany NY) Research Paper Background: Tumor purity plays a vital role in the biological process of solid tumors, but its function in gynecologic cancers remains unclear. This study explored the correlation between tumor purity and immune function of gynecological cancers and its reliability as a prognostic indicator of immunotherapy. Methods: Gynecological cancer-related datasets were downloaded from The Cancer Genome Atlas (TCGA). Tumor purity was calculated by the ESTIMATE algorithm. A LASSO Cox regression analysis was performed to construct the risk score model. A Kaplan–Meier Plotter was used to explore the relationships between tumor purity and cancer prognosis. We performed the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Set Enrichment Analysis (GSEA) to explore the pathways in the subgroups. A nomogram was used to quantitatively assess the cancer prognosis. Results: Tumor purity was negatively correlated with B cell infiltration in cervical squamous cell carcinoma and endocervical adenocarcinoma (CESC). Approximately 420 genes were positively associated with B cell infiltration and CESC prognosis and were enriched in immune-related signaling pathways. There were 11 key genes used to construct a risk score model. The low-risk group had a higher immune score and better prognosis than the high-risk group. A nomogram based on risk score, T stage, and clinical-stage had good predictive value in quantitatively evaluating CESC prognosis. Conclusions: This study is the first to reveal the correlation between tumor purity and immunity in CESC and suggests that low-risk patients may be more sensitive to immunotherapy. This provides a theoretical basis for the clinical treatment of CESC. Impact Journals 2021-11-29 /pmc/articles/PMC8660621/ /pubmed/34844217 http://dx.doi.org/10.18632/aging.203714 Text en Copyright: © 2021 Deng et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Deng, Yali
Song, Zewen
Huang, Li
Guo, Zhenni
Tong, Binghua
Sun, Meiqing
Zhao, Jin
Zhang, Huina
Zhang, Zhen
Li, Guoyin
Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer
title Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer
title_full Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer
title_fullStr Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer
title_full_unstemmed Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer
title_short Tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer
title_sort tumor purity as a prognosis and immunotherapy relevant feature in cervical cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8660621/
https://www.ncbi.nlm.nih.gov/pubmed/34844217
http://dx.doi.org/10.18632/aging.203714
work_keys_str_mv AT dengyali tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer
AT songzewen tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer
AT huangli tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer
AT guozhenni tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer
AT tongbinghua tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer
AT sunmeiqing tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer
AT zhaojin tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer
AT zhanghuina tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer
AT zhangzhen tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer
AT liguoyin tumorpurityasaprognosisandimmunotherapyrelevantfeatureincervicalcancer