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Epigenome association study for DNA methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis

Genetics (i.e., mutations) has been assumed to be the major factor in rheumatoid arthritis (RA) etiology, but accounts for a minority of the variance in disease risk for RA. In contrast to genetics, the environment can have dramatic impacts on epigenetics that associate with disease etiology. The cu...

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Autores principales: Craig, Gary, Kenney, Howard, Nilsson, Eric E., Sadler-Riggleman, Ingrid, Beck, Daniel, Skinner, Michael K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8664902/
https://www.ncbi.nlm.nih.gov/pubmed/34893669
http://dx.doi.org/10.1038/s41598-021-03170-6
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author Craig, Gary
Kenney, Howard
Nilsson, Eric E.
Sadler-Riggleman, Ingrid
Beck, Daniel
Skinner, Michael K.
author_facet Craig, Gary
Kenney, Howard
Nilsson, Eric E.
Sadler-Riggleman, Ingrid
Beck, Daniel
Skinner, Michael K.
author_sort Craig, Gary
collection PubMed
description Genetics (i.e., mutations) has been assumed to be the major factor in rheumatoid arthritis (RA) etiology, but accounts for a minority of the variance in disease risk for RA. In contrast to genetics, the environment can have dramatic impacts on epigenetics that associate with disease etiology. The current study used buccal cells and purified blood monocytes from two different clinical cohorts involving Caucasian or African American female populations with or without arthritis. The differential DNA methylation regions (DMRs) between the control and RA populations were identified with an epigenome-wide association study. The DMRs (i.e., epimutations) identified in the buccal cells and monocytes were found to be distinct. The DMR associated genes were identified and many have previously been shown to be associated with arthritis. Observations demonstrate DNA methylation epimutation RA biomarkers are cell type specific and similar findings were observed with the two racial background populations. Rheumatoid arthritis susceptibility epigenetic diagnosis appears feasible and may improve the clinical management of RA and allowpreventative medicine considerations.
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spelling pubmed-86649022021-12-13 Epigenome association study for DNA methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis Craig, Gary Kenney, Howard Nilsson, Eric E. Sadler-Riggleman, Ingrid Beck, Daniel Skinner, Michael K. Sci Rep Article Genetics (i.e., mutations) has been assumed to be the major factor in rheumatoid arthritis (RA) etiology, but accounts for a minority of the variance in disease risk for RA. In contrast to genetics, the environment can have dramatic impacts on epigenetics that associate with disease etiology. The current study used buccal cells and purified blood monocytes from two different clinical cohorts involving Caucasian or African American female populations with or without arthritis. The differential DNA methylation regions (DMRs) between the control and RA populations were identified with an epigenome-wide association study. The DMRs (i.e., epimutations) identified in the buccal cells and monocytes were found to be distinct. The DMR associated genes were identified and many have previously been shown to be associated with arthritis. Observations demonstrate DNA methylation epimutation RA biomarkers are cell type specific and similar findings were observed with the two racial background populations. Rheumatoid arthritis susceptibility epigenetic diagnosis appears feasible and may improve the clinical management of RA and allowpreventative medicine considerations. Nature Publishing Group UK 2021-12-10 /pmc/articles/PMC8664902/ /pubmed/34893669 http://dx.doi.org/10.1038/s41598-021-03170-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Craig, Gary
Kenney, Howard
Nilsson, Eric E.
Sadler-Riggleman, Ingrid
Beck, Daniel
Skinner, Michael K.
Epigenome association study for DNA methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis
title Epigenome association study for DNA methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis
title_full Epigenome association study for DNA methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis
title_fullStr Epigenome association study for DNA methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis
title_full_unstemmed Epigenome association study for DNA methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis
title_short Epigenome association study for DNA methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis
title_sort epigenome association study for dna methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8664902/
https://www.ncbi.nlm.nih.gov/pubmed/34893669
http://dx.doi.org/10.1038/s41598-021-03170-6
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