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Pyroptosis-Related Gene Signature Is a Novel Prognostic Biomarker for Sarcoma Patients

Sarcoma is a rare and an extremely aggressive form of cancer that originates from mesenchymal cells. Pyroptosis exerts a dual effect on tumours by inhibiting tumour cell proliferation while creating a microenvironment suitable for tumour cell development and proliferation. However, the significance...

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Autores principales: Wei, Dalong, Lan, Xiaoling, Huang, Zhiqun, Tang, Qiang, Wang, Zechen, Ma, Yanfei, Wei, Liuzhi, Wei, Qiuju, Zhao, Jingjie, Shen, Jiajia, He, Siyuan, Song, Jian, Meng, Lingzhang, Tang, Qianli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8665299/
https://www.ncbi.nlm.nih.gov/pubmed/34904022
http://dx.doi.org/10.1155/2021/9919842
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author Wei, Dalong
Lan, Xiaoling
Huang, Zhiqun
Tang, Qiang
Wang, Zechen
Ma, Yanfei
Wei, Liuzhi
Wei, Qiuju
Zhao, Jingjie
Shen, Jiajia
He, Siyuan
Song, Jian
Meng, Lingzhang
Tang, Qianli
author_facet Wei, Dalong
Lan, Xiaoling
Huang, Zhiqun
Tang, Qiang
Wang, Zechen
Ma, Yanfei
Wei, Liuzhi
Wei, Qiuju
Zhao, Jingjie
Shen, Jiajia
He, Siyuan
Song, Jian
Meng, Lingzhang
Tang, Qianli
author_sort Wei, Dalong
collection PubMed
description Sarcoma is a rare and an extremely aggressive form of cancer that originates from mesenchymal cells. Pyroptosis exerts a dual effect on tumours by inhibiting tumour cell proliferation while creating a microenvironment suitable for tumour cell development and proliferation. However, the significance of pyroptosis-related gene (PRG) expression in sarcoma has not yet been evaluated. Here, we conduct a retrospective analysis to examine PRG expression in 256 sarcoma samples from The Cancer Genome Atlas database. We identified the PRGs that had a significant correlation with overall patient survival in sarcoma by performing a univariate Cox regression analysis. Subsequently, we conducted a LASSO regression analysis and created a risk model for a six-PRG signature. As indicated from the Kaplan–Meier analysis, this signature revealed a significant difference between high- and low-risk sarcoma patients. A receiver operating characteristic curve analysis confirmed that this signature could predict overall patient survival in sarcoma patients with high sensitivity and specificity. Gene ontology annotation and Kyoto Encyclopaedia of Genes and Genomes pathway enrichment analyses revealed that five independent PRGs were closely associated with increased immune activity. Moreover, we also deciphered that increased number of immune cells infiltrated the tumour microenvironment in sarcoma. In brief, the PRG signature can effectively act as novel prognostic biomarker for sarcoma patients and is associated with the tumour immune microenvironment.
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spelling pubmed-86652992021-12-12 Pyroptosis-Related Gene Signature Is a Novel Prognostic Biomarker for Sarcoma Patients Wei, Dalong Lan, Xiaoling Huang, Zhiqun Tang, Qiang Wang, Zechen Ma, Yanfei Wei, Liuzhi Wei, Qiuju Zhao, Jingjie Shen, Jiajia He, Siyuan Song, Jian Meng, Lingzhang Tang, Qianli Dis Markers Research Article Sarcoma is a rare and an extremely aggressive form of cancer that originates from mesenchymal cells. Pyroptosis exerts a dual effect on tumours by inhibiting tumour cell proliferation while creating a microenvironment suitable for tumour cell development and proliferation. However, the significance of pyroptosis-related gene (PRG) expression in sarcoma has not yet been evaluated. Here, we conduct a retrospective analysis to examine PRG expression in 256 sarcoma samples from The Cancer Genome Atlas database. We identified the PRGs that had a significant correlation with overall patient survival in sarcoma by performing a univariate Cox regression analysis. Subsequently, we conducted a LASSO regression analysis and created a risk model for a six-PRG signature. As indicated from the Kaplan–Meier analysis, this signature revealed a significant difference between high- and low-risk sarcoma patients. A receiver operating characteristic curve analysis confirmed that this signature could predict overall patient survival in sarcoma patients with high sensitivity and specificity. Gene ontology annotation and Kyoto Encyclopaedia of Genes and Genomes pathway enrichment analyses revealed that five independent PRGs were closely associated with increased immune activity. Moreover, we also deciphered that increased number of immune cells infiltrated the tumour microenvironment in sarcoma. In brief, the PRG signature can effectively act as novel prognostic biomarker for sarcoma patients and is associated with the tumour immune microenvironment. Hindawi 2021-12-03 /pmc/articles/PMC8665299/ /pubmed/34904022 http://dx.doi.org/10.1155/2021/9919842 Text en Copyright © 2021 Dalong Wei et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Wei, Dalong
Lan, Xiaoling
Huang, Zhiqun
Tang, Qiang
Wang, Zechen
Ma, Yanfei
Wei, Liuzhi
Wei, Qiuju
Zhao, Jingjie
Shen, Jiajia
He, Siyuan
Song, Jian
Meng, Lingzhang
Tang, Qianli
Pyroptosis-Related Gene Signature Is a Novel Prognostic Biomarker for Sarcoma Patients
title Pyroptosis-Related Gene Signature Is a Novel Prognostic Biomarker for Sarcoma Patients
title_full Pyroptosis-Related Gene Signature Is a Novel Prognostic Biomarker for Sarcoma Patients
title_fullStr Pyroptosis-Related Gene Signature Is a Novel Prognostic Biomarker for Sarcoma Patients
title_full_unstemmed Pyroptosis-Related Gene Signature Is a Novel Prognostic Biomarker for Sarcoma Patients
title_short Pyroptosis-Related Gene Signature Is a Novel Prognostic Biomarker for Sarcoma Patients
title_sort pyroptosis-related gene signature is a novel prognostic biomarker for sarcoma patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8665299/
https://www.ncbi.nlm.nih.gov/pubmed/34904022
http://dx.doi.org/10.1155/2021/9919842
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