Cargando…
Quantifying Cyanothece growth under DIC limitation
The photoautotrophic, unicellular N(2)-fixer, Cyanothece, is a model organism that has been widely used to study photosynthesis regulation, the structure of photosystems, and the temporal segregation of carbon (C) and nitrogen (N) fixation in light and dark phases of the diel cycle. Here, we present...
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8665340/ https://www.ncbi.nlm.nih.gov/pubmed/34938417 http://dx.doi.org/10.1016/j.csbj.2021.11.036 |
_version_ | 1784613987683401728 |
---|---|
author | Inomura, Keisuke Masuda, Takako Eichner, Meri Rabouille, Sophie Zavřel, Tomáš Červený, Jan Vancová, Marie Bernát, Gábor Armin, Gabrielle Claquin, Pascal Kotabová, Eva Stephan, Susanne Suggett, David J. Deutsch, Curtis Prášil, Ondřej |
author_facet | Inomura, Keisuke Masuda, Takako Eichner, Meri Rabouille, Sophie Zavřel, Tomáš Červený, Jan Vancová, Marie Bernát, Gábor Armin, Gabrielle Claquin, Pascal Kotabová, Eva Stephan, Susanne Suggett, David J. Deutsch, Curtis Prášil, Ondřej |
author_sort | Inomura, Keisuke |
collection | PubMed |
description | The photoautotrophic, unicellular N(2)-fixer, Cyanothece, is a model organism that has been widely used to study photosynthesis regulation, the structure of photosystems, and the temporal segregation of carbon (C) and nitrogen (N) fixation in light and dark phases of the diel cycle. Here, we present a simple quantitative model and experimental data that together, suggest external dissolved inorganic carbon (DIC) concentration as a major limiting factor for Cyanothece growth, due to its high C-storage requirement. Using experimental data from a parallel laboratory study as a basis, we show that after the onset of the light period, DIC was rapidly consumed by photosynthesis, leading to a sharp drop in the rate of photosynthesis and C accumulation. In N(2)-fixing cultures, high rates of photosynthesis in the morning enabled rapid conversion of DIC to intracellular C storage, hastening DIC consumption to levels that limited further uptake. The N(2)-fixing condition allows only a small fraction of fixed C for cellular growth since a large fraction was reserved in storage to fuel night-time N(2) fixation. Our model provides a framework for resolving DIC limitation in aquatic ecosystem simulations, where DIC as a growth-limiting factor has rarely been considered, and importantly emphasizes the effect of intracellular C allocation on growth rate that varies depending on the growth environment. |
format | Online Article Text |
id | pubmed-8665340 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Research Network of Computational and Structural Biotechnology |
record_format | MEDLINE/PubMed |
spelling | pubmed-86653402021-12-21 Quantifying Cyanothece growth under DIC limitation Inomura, Keisuke Masuda, Takako Eichner, Meri Rabouille, Sophie Zavřel, Tomáš Červený, Jan Vancová, Marie Bernát, Gábor Armin, Gabrielle Claquin, Pascal Kotabová, Eva Stephan, Susanne Suggett, David J. Deutsch, Curtis Prášil, Ondřej Comput Struct Biotechnol J Research Article The photoautotrophic, unicellular N(2)-fixer, Cyanothece, is a model organism that has been widely used to study photosynthesis regulation, the structure of photosystems, and the temporal segregation of carbon (C) and nitrogen (N) fixation in light and dark phases of the diel cycle. Here, we present a simple quantitative model and experimental data that together, suggest external dissolved inorganic carbon (DIC) concentration as a major limiting factor for Cyanothece growth, due to its high C-storage requirement. Using experimental data from a parallel laboratory study as a basis, we show that after the onset of the light period, DIC was rapidly consumed by photosynthesis, leading to a sharp drop in the rate of photosynthesis and C accumulation. In N(2)-fixing cultures, high rates of photosynthesis in the morning enabled rapid conversion of DIC to intracellular C storage, hastening DIC consumption to levels that limited further uptake. The N(2)-fixing condition allows only a small fraction of fixed C for cellular growth since a large fraction was reserved in storage to fuel night-time N(2) fixation. Our model provides a framework for resolving DIC limitation in aquatic ecosystem simulations, where DIC as a growth-limiting factor has rarely been considered, and importantly emphasizes the effect of intracellular C allocation on growth rate that varies depending on the growth environment. Research Network of Computational and Structural Biotechnology 2021-11-29 /pmc/articles/PMC8665340/ /pubmed/34938417 http://dx.doi.org/10.1016/j.csbj.2021.11.036 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Research Article Inomura, Keisuke Masuda, Takako Eichner, Meri Rabouille, Sophie Zavřel, Tomáš Červený, Jan Vancová, Marie Bernát, Gábor Armin, Gabrielle Claquin, Pascal Kotabová, Eva Stephan, Susanne Suggett, David J. Deutsch, Curtis Prášil, Ondřej Quantifying Cyanothece growth under DIC limitation |
title | Quantifying Cyanothece growth under DIC limitation |
title_full | Quantifying Cyanothece growth under DIC limitation |
title_fullStr | Quantifying Cyanothece growth under DIC limitation |
title_full_unstemmed | Quantifying Cyanothece growth under DIC limitation |
title_short | Quantifying Cyanothece growth under DIC limitation |
title_sort | quantifying cyanothece growth under dic limitation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8665340/ https://www.ncbi.nlm.nih.gov/pubmed/34938417 http://dx.doi.org/10.1016/j.csbj.2021.11.036 |
work_keys_str_mv | AT inomurakeisuke quantifyingcyanothecegrowthunderdiclimitation AT masudatakako quantifyingcyanothecegrowthunderdiclimitation AT eichnermeri quantifyingcyanothecegrowthunderdiclimitation AT rabouillesophie quantifyingcyanothecegrowthunderdiclimitation AT zavreltomas quantifyingcyanothecegrowthunderdiclimitation AT cervenyjan quantifyingcyanothecegrowthunderdiclimitation AT vancovamarie quantifyingcyanothecegrowthunderdiclimitation AT bernatgabor quantifyingcyanothecegrowthunderdiclimitation AT armingabrielle quantifyingcyanothecegrowthunderdiclimitation AT claquinpascal quantifyingcyanothecegrowthunderdiclimitation AT kotabovaeva quantifyingcyanothecegrowthunderdiclimitation AT stephansusanne quantifyingcyanothecegrowthunderdiclimitation AT suggettdavidj quantifyingcyanothecegrowthunderdiclimitation AT deutschcurtis quantifyingcyanothecegrowthunderdiclimitation AT prasilondrej quantifyingcyanothecegrowthunderdiclimitation |