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Quantifying Cyanothece growth under DIC limitation

The photoautotrophic, unicellular N(2)-fixer, Cyanothece, is a model organism that has been widely used to study photosynthesis regulation, the structure of photosystems, and the temporal segregation of carbon (C) and nitrogen (N) fixation in light and dark phases of the diel cycle. Here, we present...

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Autores principales: Inomura, Keisuke, Masuda, Takako, Eichner, Meri, Rabouille, Sophie, Zavřel, Tomáš, Červený, Jan, Vancová, Marie, Bernát, Gábor, Armin, Gabrielle, Claquin, Pascal, Kotabová, Eva, Stephan, Susanne, Suggett, David J., Deutsch, Curtis, Prášil, Ondřej
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8665340/
https://www.ncbi.nlm.nih.gov/pubmed/34938417
http://dx.doi.org/10.1016/j.csbj.2021.11.036
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author Inomura, Keisuke
Masuda, Takako
Eichner, Meri
Rabouille, Sophie
Zavřel, Tomáš
Červený, Jan
Vancová, Marie
Bernát, Gábor
Armin, Gabrielle
Claquin, Pascal
Kotabová, Eva
Stephan, Susanne
Suggett, David J.
Deutsch, Curtis
Prášil, Ondřej
author_facet Inomura, Keisuke
Masuda, Takako
Eichner, Meri
Rabouille, Sophie
Zavřel, Tomáš
Červený, Jan
Vancová, Marie
Bernát, Gábor
Armin, Gabrielle
Claquin, Pascal
Kotabová, Eva
Stephan, Susanne
Suggett, David J.
Deutsch, Curtis
Prášil, Ondřej
author_sort Inomura, Keisuke
collection PubMed
description The photoautotrophic, unicellular N(2)-fixer, Cyanothece, is a model organism that has been widely used to study photosynthesis regulation, the structure of photosystems, and the temporal segregation of carbon (C) and nitrogen (N) fixation in light and dark phases of the diel cycle. Here, we present a simple quantitative model and experimental data that together, suggest external dissolved inorganic carbon (DIC) concentration as a major limiting factor for Cyanothece growth, due to its high C-storage requirement. Using experimental data from a parallel laboratory study as a basis, we show that after the onset of the light period, DIC was rapidly consumed by photosynthesis, leading to a sharp drop in the rate of photosynthesis and C accumulation. In N(2)-fixing cultures, high rates of photosynthesis in the morning enabled rapid conversion of DIC to intracellular C storage, hastening DIC consumption to levels that limited further uptake. The N(2)-fixing condition allows only a small fraction of fixed C for cellular growth since a large fraction was reserved in storage to fuel night-time N(2) fixation. Our model provides a framework for resolving DIC limitation in aquatic ecosystem simulations, where DIC as a growth-limiting factor has rarely been considered, and importantly emphasizes the effect of intracellular C allocation on growth rate that varies depending on the growth environment.
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spelling pubmed-86653402021-12-21 Quantifying Cyanothece growth under DIC limitation Inomura, Keisuke Masuda, Takako Eichner, Meri Rabouille, Sophie Zavřel, Tomáš Červený, Jan Vancová, Marie Bernát, Gábor Armin, Gabrielle Claquin, Pascal Kotabová, Eva Stephan, Susanne Suggett, David J. Deutsch, Curtis Prášil, Ondřej Comput Struct Biotechnol J Research Article The photoautotrophic, unicellular N(2)-fixer, Cyanothece, is a model organism that has been widely used to study photosynthesis regulation, the structure of photosystems, and the temporal segregation of carbon (C) and nitrogen (N) fixation in light and dark phases of the diel cycle. Here, we present a simple quantitative model and experimental data that together, suggest external dissolved inorganic carbon (DIC) concentration as a major limiting factor for Cyanothece growth, due to its high C-storage requirement. Using experimental data from a parallel laboratory study as a basis, we show that after the onset of the light period, DIC was rapidly consumed by photosynthesis, leading to a sharp drop in the rate of photosynthesis and C accumulation. In N(2)-fixing cultures, high rates of photosynthesis in the morning enabled rapid conversion of DIC to intracellular C storage, hastening DIC consumption to levels that limited further uptake. The N(2)-fixing condition allows only a small fraction of fixed C for cellular growth since a large fraction was reserved in storage to fuel night-time N(2) fixation. Our model provides a framework for resolving DIC limitation in aquatic ecosystem simulations, where DIC as a growth-limiting factor has rarely been considered, and importantly emphasizes the effect of intracellular C allocation on growth rate that varies depending on the growth environment. Research Network of Computational and Structural Biotechnology 2021-11-29 /pmc/articles/PMC8665340/ /pubmed/34938417 http://dx.doi.org/10.1016/j.csbj.2021.11.036 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
Inomura, Keisuke
Masuda, Takako
Eichner, Meri
Rabouille, Sophie
Zavřel, Tomáš
Červený, Jan
Vancová, Marie
Bernát, Gábor
Armin, Gabrielle
Claquin, Pascal
Kotabová, Eva
Stephan, Susanne
Suggett, David J.
Deutsch, Curtis
Prášil, Ondřej
Quantifying Cyanothece growth under DIC limitation
title Quantifying Cyanothece growth under DIC limitation
title_full Quantifying Cyanothece growth under DIC limitation
title_fullStr Quantifying Cyanothece growth under DIC limitation
title_full_unstemmed Quantifying Cyanothece growth under DIC limitation
title_short Quantifying Cyanothece growth under DIC limitation
title_sort quantifying cyanothece growth under dic limitation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8665340/
https://www.ncbi.nlm.nih.gov/pubmed/34938417
http://dx.doi.org/10.1016/j.csbj.2021.11.036
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