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Development of Real-Time PCR Based on A137R Gene for the Detection of African Swine Fever Virus
African swine fever virus (ASFV) can infect domestic pigs and wild boars and causes huge economic losses in global swine industry. Therefore, early diagnosis of ASFV is important for the control and eradication of African swine fever (ASF). In this study, a SYBR Green-based real-time polymerase chai...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8666952/ https://www.ncbi.nlm.nih.gov/pubmed/34912874 http://dx.doi.org/10.3389/fvets.2021.753967 |
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author | Yin, Dan Geng, Renhao Lv, Hui Bao, Chunhui Shao, Hongxia Ye, Jianqiang Qian, Kun Qin, Aijian |
author_facet | Yin, Dan Geng, Renhao Lv, Hui Bao, Chunhui Shao, Hongxia Ye, Jianqiang Qian, Kun Qin, Aijian |
author_sort | Yin, Dan |
collection | PubMed |
description | African swine fever virus (ASFV) can infect domestic pigs and wild boars and causes huge economic losses in global swine industry. Therefore, early diagnosis of ASFV is important for the control and eradication of African swine fever (ASF). In this study, a SYBR Green-based real-time polymerase chain reaction (PCR) assay targeting the viral encoded A137R gene was established for the detection of ASFV infection. For the evaluation of the established real-time PCR, 34 clinical samples were assessed by both the A137R gene-based real-time PCR and OIE-recommended TaqMan PCR. The results showed that 85.29% (29/34) were detected by A137R gene-based real-time PCR, but only 79.41% (27/34) positive using OIE-recommended TaqMan PCR. Moreover, no cross-reaction with other common swine pathogens was found in the A137R gene-based real-time PCR. These results demonstrated that the established real-time PCR assay in this study showed better performance than the OIE-recommended method in detecting ASFV from clinical samples, which could be applied for control and eradication programs of ASF. |
format | Online Article Text |
id | pubmed-8666952 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86669522021-12-14 Development of Real-Time PCR Based on A137R Gene for the Detection of African Swine Fever Virus Yin, Dan Geng, Renhao Lv, Hui Bao, Chunhui Shao, Hongxia Ye, Jianqiang Qian, Kun Qin, Aijian Front Vet Sci Veterinary Science African swine fever virus (ASFV) can infect domestic pigs and wild boars and causes huge economic losses in global swine industry. Therefore, early diagnosis of ASFV is important for the control and eradication of African swine fever (ASF). In this study, a SYBR Green-based real-time polymerase chain reaction (PCR) assay targeting the viral encoded A137R gene was established for the detection of ASFV infection. For the evaluation of the established real-time PCR, 34 clinical samples were assessed by both the A137R gene-based real-time PCR and OIE-recommended TaqMan PCR. The results showed that 85.29% (29/34) were detected by A137R gene-based real-time PCR, but only 79.41% (27/34) positive using OIE-recommended TaqMan PCR. Moreover, no cross-reaction with other common swine pathogens was found in the A137R gene-based real-time PCR. These results demonstrated that the established real-time PCR assay in this study showed better performance than the OIE-recommended method in detecting ASFV from clinical samples, which could be applied for control and eradication programs of ASF. Frontiers Media S.A. 2021-11-29 /pmc/articles/PMC8666952/ /pubmed/34912874 http://dx.doi.org/10.3389/fvets.2021.753967 Text en Copyright © 2021 Yin, Geng, Lv, Bao, Shao, Ye, Qian and Qin. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Veterinary Science Yin, Dan Geng, Renhao Lv, Hui Bao, Chunhui Shao, Hongxia Ye, Jianqiang Qian, Kun Qin, Aijian Development of Real-Time PCR Based on A137R Gene for the Detection of African Swine Fever Virus |
title | Development of Real-Time PCR Based on A137R Gene for the Detection of African Swine Fever Virus |
title_full | Development of Real-Time PCR Based on A137R Gene for the Detection of African Swine Fever Virus |
title_fullStr | Development of Real-Time PCR Based on A137R Gene for the Detection of African Swine Fever Virus |
title_full_unstemmed | Development of Real-Time PCR Based on A137R Gene for the Detection of African Swine Fever Virus |
title_short | Development of Real-Time PCR Based on A137R Gene for the Detection of African Swine Fever Virus |
title_sort | development of real-time pcr based on a137r gene for the detection of african swine fever virus |
topic | Veterinary Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8666952/ https://www.ncbi.nlm.nih.gov/pubmed/34912874 http://dx.doi.org/10.3389/fvets.2021.753967 |
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