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Complete chloroplast genome of a cultivated oil camellia species, Camellia gigantocarpa
Camellia gigantocarpa Hu et T. C. Huang, belonging to the Theaceae family, is an excellent landscape tree species with high ornamental value. It is also an important woody oil-bearing plant with high economic value. This study reports the first complete chloroplast genome sequence of C. gigantocarpa...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8667929/ https://www.ncbi.nlm.nih.gov/pubmed/34912966 http://dx.doi.org/10.1080/23802359.2021.2008836 |
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author | Xu, Yufen Liu, Yanju Jia, Xiaocheng |
author_facet | Xu, Yufen Liu, Yanju Jia, Xiaocheng |
author_sort | Xu, Yufen |
collection | PubMed |
description | Camellia gigantocarpa Hu et T. C. Huang, belonging to the Theaceae family, is an excellent landscape tree species with high ornamental value. It is also an important woody oil-bearing plant with high economic value. This study reports the first complete chloroplast genome sequence of C. gigantocarpa (GenBank accession number: MZ054232). Its whole chloroplast genome is 156,953 bp long with an overall GC content of 37.31%, which is composed of a large single copy region (86,631 bp), a small single copy region (18,402 bp), and a pair of inverted repeat regions (25,960 bp each). A total of 135 genes were predicted in this genome, namely eight ribosomal RNA genes, 37 transfer RNA genes, and 90 protein-coding genes. Based on maximum likelihood analysis results, we found that the Camellia species are clustered into a distinct branch, and the phylogenetic relationships among C. gigantocarpa, C. crapnelliana, and C. kissii were the closest. |
format | Online Article Text |
id | pubmed-8667929 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-86679292021-12-14 Complete chloroplast genome of a cultivated oil camellia species, Camellia gigantocarpa Xu, Yufen Liu, Yanju Jia, Xiaocheng Mitochondrial DNA B Resour Mitogenome Announcement Camellia gigantocarpa Hu et T. C. Huang, belonging to the Theaceae family, is an excellent landscape tree species with high ornamental value. It is also an important woody oil-bearing plant with high economic value. This study reports the first complete chloroplast genome sequence of C. gigantocarpa (GenBank accession number: MZ054232). Its whole chloroplast genome is 156,953 bp long with an overall GC content of 37.31%, which is composed of a large single copy region (86,631 bp), a small single copy region (18,402 bp), and a pair of inverted repeat regions (25,960 bp each). A total of 135 genes were predicted in this genome, namely eight ribosomal RNA genes, 37 transfer RNA genes, and 90 protein-coding genes. Based on maximum likelihood analysis results, we found that the Camellia species are clustered into a distinct branch, and the phylogenetic relationships among C. gigantocarpa, C. crapnelliana, and C. kissii were the closest. Taylor & Francis 2021-12-10 /pmc/articles/PMC8667929/ /pubmed/34912966 http://dx.doi.org/10.1080/23802359.2021.2008836 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Xu, Yufen Liu, Yanju Jia, Xiaocheng Complete chloroplast genome of a cultivated oil camellia species, Camellia gigantocarpa |
title | Complete chloroplast genome of a cultivated oil camellia species, Camellia gigantocarpa |
title_full | Complete chloroplast genome of a cultivated oil camellia species, Camellia gigantocarpa |
title_fullStr | Complete chloroplast genome of a cultivated oil camellia species, Camellia gigantocarpa |
title_full_unstemmed | Complete chloroplast genome of a cultivated oil camellia species, Camellia gigantocarpa |
title_short | Complete chloroplast genome of a cultivated oil camellia species, Camellia gigantocarpa |
title_sort | complete chloroplast genome of a cultivated oil camellia species, camellia gigantocarpa |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8667929/ https://www.ncbi.nlm.nih.gov/pubmed/34912966 http://dx.doi.org/10.1080/23802359.2021.2008836 |
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