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Characterization of the complete chloroplast genome sequence of Gynostemma microspermum (Cucurbitaceae)

Gynostemma microspermum C. Y. Wu et S. K. Chen is an endemic creeping herbaceous species mainly distributed in dense forests on limestone in northwestern China. Here, the complete chloroplast genome sequence of G. microspermum was obtained by Illumina pair-end sequencing. The circular complete chlor...

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Detalles Bibliográficos
Autores principales: Zhang, Xiao, Chen, Xiaodan, Zhang, Hao, Zhao, Yuemei, Ju, Miaomiao, Zhao, Guifang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8667937/
https://www.ncbi.nlm.nih.gov/pubmed/34912963
http://dx.doi.org/10.1080/23802359.2021.2007811
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author Zhang, Xiao
Chen, Xiaodan
Zhang, Hao
Zhao, Yuemei
Ju, Miaomiao
Zhao, Guifang
author_facet Zhang, Xiao
Chen, Xiaodan
Zhang, Hao
Zhao, Yuemei
Ju, Miaomiao
Zhao, Guifang
author_sort Zhang, Xiao
collection PubMed
description Gynostemma microspermum C. Y. Wu et S. K. Chen is an endemic creeping herbaceous species mainly distributed in dense forests on limestone in northwestern China. Here, the complete chloroplast genome sequence of G. microspermum was obtained by Illumina pair-end sequencing. The circular complete chloroplast genome of G. microspermum is 158,692 bp in length and contains a large single copy region (87,452 bp), a small single copy region (19,068 bp) and two short inverted repeat regions (26,086 bp). The genome sequence encodes 133 genes including 87 protein-coding genes, 37 transfer RNA genes, 8 ribosomal RNA genes and 1 pseudogene. The maximum likelihood (ML) phylogeny estimation shows that G. microspermum is sister to all other analyzed species of the genus Gynostemma with high bootstrap support.
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spelling pubmed-86679372021-12-14 Characterization of the complete chloroplast genome sequence of Gynostemma microspermum (Cucurbitaceae) Zhang, Xiao Chen, Xiaodan Zhang, Hao Zhao, Yuemei Ju, Miaomiao Zhao, Guifang Mitochondrial DNA B Resour Mitogenome Announcement Gynostemma microspermum C. Y. Wu et S. K. Chen is an endemic creeping herbaceous species mainly distributed in dense forests on limestone in northwestern China. Here, the complete chloroplast genome sequence of G. microspermum was obtained by Illumina pair-end sequencing. The circular complete chloroplast genome of G. microspermum is 158,692 bp in length and contains a large single copy region (87,452 bp), a small single copy region (19,068 bp) and two short inverted repeat regions (26,086 bp). The genome sequence encodes 133 genes including 87 protein-coding genes, 37 transfer RNA genes, 8 ribosomal RNA genes and 1 pseudogene. The maximum likelihood (ML) phylogeny estimation shows that G. microspermum is sister to all other analyzed species of the genus Gynostemma with high bootstrap support. Taylor & Francis 2021-12-10 /pmc/articles/PMC8667937/ /pubmed/34912963 http://dx.doi.org/10.1080/23802359.2021.2007811 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Xiao
Chen, Xiaodan
Zhang, Hao
Zhao, Yuemei
Ju, Miaomiao
Zhao, Guifang
Characterization of the complete chloroplast genome sequence of Gynostemma microspermum (Cucurbitaceae)
title Characterization of the complete chloroplast genome sequence of Gynostemma microspermum (Cucurbitaceae)
title_full Characterization of the complete chloroplast genome sequence of Gynostemma microspermum (Cucurbitaceae)
title_fullStr Characterization of the complete chloroplast genome sequence of Gynostemma microspermum (Cucurbitaceae)
title_full_unstemmed Characterization of the complete chloroplast genome sequence of Gynostemma microspermum (Cucurbitaceae)
title_short Characterization of the complete chloroplast genome sequence of Gynostemma microspermum (Cucurbitaceae)
title_sort characterization of the complete chloroplast genome sequence of gynostemma microspermum (cucurbitaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8667937/
https://www.ncbi.nlm.nih.gov/pubmed/34912963
http://dx.doi.org/10.1080/23802359.2021.2007811
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