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The complete chloroplast genome sequence of Artabotrys pilosus (Annonaceae)
Artabotrys pilosus (Annonaceae) is endemic to China, this plant has high medicinal value and broad application prospect. In this study, we assembled and systematically analyzed the chloroplast genome of A. pilosus on the basis of DNA sequencing using high-throughput techniques. The chloroplast seque...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8667941/ https://www.ncbi.nlm.nih.gov/pubmed/34912957 http://dx.doi.org/10.1080/23802359.2021.2005495 |
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author | Liang, Ze-rui Lei, Jin-man Zhang, Hui Li, Yong-quan Zhang, Bipei |
author_facet | Liang, Ze-rui Lei, Jin-man Zhang, Hui Li, Yong-quan Zhang, Bipei |
author_sort | Liang, Ze-rui |
collection | PubMed |
description | Artabotrys pilosus (Annonaceae) is endemic to China, this plant has high medicinal value and broad application prospect. In this study, we assembled and systematically analyzed the chloroplast genome of A. pilosus on the basis of DNA sequencing using high-throughput techniques. The chloroplast sequence of A. pilosus was 178,195 bp in length, including two inverted repeat regions of 42,150 bp, a large single-copy region of 90,797 bp and a small single-copy region of 3098 bp. It was predicted to contain 142 genes, of which 96 are coding, 38 are tRNA genes, and eight are rRNA genes. The overall GC content was 38.8%; this was higher in the IRs (40.4%) when compared to the LSC (37.6%) and the SSC (32%) regions. Phylogenetic analysis showed that A. pilosus is in subfamily Annonoideae. |
format | Online Article Text |
id | pubmed-8667941 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-86679412021-12-14 The complete chloroplast genome sequence of Artabotrys pilosus (Annonaceae) Liang, Ze-rui Lei, Jin-man Zhang, Hui Li, Yong-quan Zhang, Bipei Mitochondrial DNA B Resour Mitogenome Announcement Artabotrys pilosus (Annonaceae) is endemic to China, this plant has high medicinal value and broad application prospect. In this study, we assembled and systematically analyzed the chloroplast genome of A. pilosus on the basis of DNA sequencing using high-throughput techniques. The chloroplast sequence of A. pilosus was 178,195 bp in length, including two inverted repeat regions of 42,150 bp, a large single-copy region of 90,797 bp and a small single-copy region of 3098 bp. It was predicted to contain 142 genes, of which 96 are coding, 38 are tRNA genes, and eight are rRNA genes. The overall GC content was 38.8%; this was higher in the IRs (40.4%) when compared to the LSC (37.6%) and the SSC (32%) regions. Phylogenetic analysis showed that A. pilosus is in subfamily Annonoideae. Taylor & Francis 2021-12-10 /pmc/articles/PMC8667941/ /pubmed/34912957 http://dx.doi.org/10.1080/23802359.2021.2005495 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Liang, Ze-rui Lei, Jin-man Zhang, Hui Li, Yong-quan Zhang, Bipei The complete chloroplast genome sequence of Artabotrys pilosus (Annonaceae) |
title | The complete chloroplast genome sequence of Artabotrys pilosus (Annonaceae) |
title_full | The complete chloroplast genome sequence of Artabotrys pilosus (Annonaceae) |
title_fullStr | The complete chloroplast genome sequence of Artabotrys pilosus (Annonaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Artabotrys pilosus (Annonaceae) |
title_short | The complete chloroplast genome sequence of Artabotrys pilosus (Annonaceae) |
title_sort | complete chloroplast genome sequence of artabotrys pilosus (annonaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8667941/ https://www.ncbi.nlm.nih.gov/pubmed/34912957 http://dx.doi.org/10.1080/23802359.2021.2005495 |
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