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Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups
The five oligonucleotide primers (oligo-primers) turned out a total of 335 fragments (FMs) (52.9%) in the blue crab (Portunus trituberculatus) group alpha and 298 FMs (47.1%) in the crab group beta, with the FM scales range varying from 100 bp to 2,000 bp. The highest band-sharing (BS) value (0.907)...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Korean Society of Developmental Biology
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8670772/ https://www.ncbi.nlm.nih.gov/pubmed/34950821 http://dx.doi.org/10.12717/DR.2021.25.3.185 |
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author | Song, Young-Jae Yoon, Jong-Man |
author_facet | Song, Young-Jae Yoon, Jong-Man |
author_sort | Song, Young-Jae |
collection | PubMed |
description | The five oligonucleotide primers (oligo-primers) turned out a total of 335 fragments (FMs) (52.9%) in the blue crab (Portunus trituberculatus) group alpha and 298 FMs (47.1%) in the crab group beta, with the FM scales range varying from 100 bp to 2,000 bp. The highest band-sharing (BS) value (0.907) was found between individual’s no. 19 and no. 20 within the blue crab group beta. Parties in the blue crab group beta (0.601±0.017) had higher BS rates than did parties from the crab group alpha (0.563±0.017) (p<0.05). The polar dendrogram got by the five oligo-primers points out two genetic extents: bundle I (BLUECRAB 01, 03, 04, 05, 06, 08, and 10) and bundle II (BLUECRAB 02, 07, 09. 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, and 22). The OPD-01 primer revealed 22 loci shared by all the examples of the as FMs of 1,000 bp. The oligo-primer OPA-05 made unique loci shared to each group (ULSEG), almost 400 bp and 500 bp, individually, in blue crab group beta. The remaining oligo-primers did not reveal any loci shared by the two crab groups (LSTG). The average number of ULSEG was diverse and 1.6-fold higher in the crab group beta than in the crab group alpha. |
format | Online Article Text |
id | pubmed-8670772 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Korean Society of Developmental Biology |
record_format | MEDLINE/PubMed |
spelling | pubmed-86707722021-12-22 Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups Song, Young-Jae Yoon, Jong-Man Dev Reprod Short Communication The five oligonucleotide primers (oligo-primers) turned out a total of 335 fragments (FMs) (52.9%) in the blue crab (Portunus trituberculatus) group alpha and 298 FMs (47.1%) in the crab group beta, with the FM scales range varying from 100 bp to 2,000 bp. The highest band-sharing (BS) value (0.907) was found between individual’s no. 19 and no. 20 within the blue crab group beta. Parties in the blue crab group beta (0.601±0.017) had higher BS rates than did parties from the crab group alpha (0.563±0.017) (p<0.05). The polar dendrogram got by the five oligo-primers points out two genetic extents: bundle I (BLUECRAB 01, 03, 04, 05, 06, 08, and 10) and bundle II (BLUECRAB 02, 07, 09. 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, and 22). The OPD-01 primer revealed 22 loci shared by all the examples of the as FMs of 1,000 bp. The oligo-primer OPA-05 made unique loci shared to each group (ULSEG), almost 400 bp and 500 bp, individually, in blue crab group beta. The remaining oligo-primers did not reveal any loci shared by the two crab groups (LSTG). The average number of ULSEG was diverse and 1.6-fold higher in the crab group beta than in the crab group alpha. Korean Society of Developmental Biology 2021-09 2021-09-30 /pmc/articles/PMC8670772/ /pubmed/34950821 http://dx.doi.org/10.12717/DR.2021.25.3.185 Text en Copyright © 2021 The Korean Society of Developmental Biology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Communication Song, Young-Jae Yoon, Jong-Man Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups |
title | Genetic Variations within and between Blue Crab (Portunus
trituberculatus) Groups |
title_full | Genetic Variations within and between Blue Crab (Portunus
trituberculatus) Groups |
title_fullStr | Genetic Variations within and between Blue Crab (Portunus
trituberculatus) Groups |
title_full_unstemmed | Genetic Variations within and between Blue Crab (Portunus
trituberculatus) Groups |
title_short | Genetic Variations within and between Blue Crab (Portunus
trituberculatus) Groups |
title_sort | genetic variations within and between blue crab (portunus
trituberculatus) groups |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8670772/ https://www.ncbi.nlm.nih.gov/pubmed/34950821 http://dx.doi.org/10.12717/DR.2021.25.3.185 |
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