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Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups

The five oligonucleotide primers (oligo-primers) turned out a total of 335 fragments (FMs) (52.9%) in the blue crab (Portunus trituberculatus) group alpha and 298 FMs (47.1%) in the crab group beta, with the FM scales range varying from 100 bp to 2,000 bp. The highest band-sharing (BS) value (0.907)...

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Autores principales: Song, Young-Jae, Yoon, Jong-Man
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society of Developmental Biology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8670772/
https://www.ncbi.nlm.nih.gov/pubmed/34950821
http://dx.doi.org/10.12717/DR.2021.25.3.185
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author Song, Young-Jae
Yoon, Jong-Man
author_facet Song, Young-Jae
Yoon, Jong-Man
author_sort Song, Young-Jae
collection PubMed
description The five oligonucleotide primers (oligo-primers) turned out a total of 335 fragments (FMs) (52.9%) in the blue crab (Portunus trituberculatus) group alpha and 298 FMs (47.1%) in the crab group beta, with the FM scales range varying from 100 bp to 2,000 bp. The highest band-sharing (BS) value (0.907) was found between individual’s no. 19 and no. 20 within the blue crab group beta. Parties in the blue crab group beta (0.601±0.017) had higher BS rates than did parties from the crab group alpha (0.563±0.017) (p<0.05). The polar dendrogram got by the five oligo-primers points out two genetic extents: bundle I (BLUECRAB 01, 03, 04, 05, 06, 08, and 10) and bundle II (BLUECRAB 02, 07, 09. 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, and 22). The OPD-01 primer revealed 22 loci shared by all the examples of the as FMs of 1,000 bp. The oligo-primer OPA-05 made unique loci shared to each group (ULSEG), almost 400 bp and 500 bp, individually, in blue crab group beta. The remaining oligo-primers did not reveal any loci shared by the two crab groups (LSTG). The average number of ULSEG was diverse and 1.6-fold higher in the crab group beta than in the crab group alpha.
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spelling pubmed-86707722021-12-22 Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups Song, Young-Jae Yoon, Jong-Man Dev Reprod Short Communication The five oligonucleotide primers (oligo-primers) turned out a total of 335 fragments (FMs) (52.9%) in the blue crab (Portunus trituberculatus) group alpha and 298 FMs (47.1%) in the crab group beta, with the FM scales range varying from 100 bp to 2,000 bp. The highest band-sharing (BS) value (0.907) was found between individual’s no. 19 and no. 20 within the blue crab group beta. Parties in the blue crab group beta (0.601±0.017) had higher BS rates than did parties from the crab group alpha (0.563±0.017) (p<0.05). The polar dendrogram got by the five oligo-primers points out two genetic extents: bundle I (BLUECRAB 01, 03, 04, 05, 06, 08, and 10) and bundle II (BLUECRAB 02, 07, 09. 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, and 22). The OPD-01 primer revealed 22 loci shared by all the examples of the as FMs of 1,000 bp. The oligo-primer OPA-05 made unique loci shared to each group (ULSEG), almost 400 bp and 500 bp, individually, in blue crab group beta. The remaining oligo-primers did not reveal any loci shared by the two crab groups (LSTG). The average number of ULSEG was diverse and 1.6-fold higher in the crab group beta than in the crab group alpha. Korean Society of Developmental Biology 2021-09 2021-09-30 /pmc/articles/PMC8670772/ /pubmed/34950821 http://dx.doi.org/10.12717/DR.2021.25.3.185 Text en Copyright © 2021 The Korean Society of Developmental Biology. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Communication
Song, Young-Jae
Yoon, Jong-Man
Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups
title Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups
title_full Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups
title_fullStr Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups
title_full_unstemmed Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups
title_short Genetic Variations within and between Blue Crab (Portunus trituberculatus) Groups
title_sort genetic variations within and between blue crab (portunus trituberculatus) groups
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8670772/
https://www.ncbi.nlm.nih.gov/pubmed/34950821
http://dx.doi.org/10.12717/DR.2021.25.3.185
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