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Novel Genes Potentially Involved in Fibroblasts of Diabetic Wound

Fibroblasts are the essential cell type of skin, highly involved in the wound regeneration process. In this study, we sought to screen out the novel genes which act important roles in diabetic fibroblasts through bioinformatic methods. A total of 811 and 490 differentially expressed genes (DEGs) bet...

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Detalles Bibliográficos
Autores principales: Zhu, Weirong, Fang, Qin, Liu, Zhao, Chen, Qiming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8670931/
https://www.ncbi.nlm.nih.gov/pubmed/34917686
http://dx.doi.org/10.1155/2021/7619610
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author Zhu, Weirong
Fang, Qin
Liu, Zhao
Chen, Qiming
author_facet Zhu, Weirong
Fang, Qin
Liu, Zhao
Chen, Qiming
author_sort Zhu, Weirong
collection PubMed
description Fibroblasts are the essential cell type of skin, highly involved in the wound regeneration process. In this study, we sought to screen out the novel genes which act important roles in diabetic fibroblasts through bioinformatic methods. A total of 811 and 490 differentially expressed genes (DEGs) between diabetic and normal fibroblasts were screened out in GSE49566 and GSE78891, respectively. Furthermore, the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways involved in type 2 diabetes were retrieved from miRWalk. Consequently, the integrated bioinformatic analyses revealed the shared KEGG pathways between DEG-identified and diabetes-related pathways were functionally enriched in the MAPK signaling pathway, and the MAPKAPK3, HSPA2, TGFBR1, and p53 signaling pathways were involved. Finally, ETV4 and NPE2 were identified as the targeted transcript factors of MAPKAPK3, HSPA2, and TGFBR1. Our findings may throw novel sight in elucidating the molecular mechanisms of fibroblast pathologies in patients with diabetic wounds and targeting new factors to advance diabetic wound treatment in clinic.
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spelling pubmed-86709312021-12-15 Novel Genes Potentially Involved in Fibroblasts of Diabetic Wound Zhu, Weirong Fang, Qin Liu, Zhao Chen, Qiming J Diabetes Res Research Article Fibroblasts are the essential cell type of skin, highly involved in the wound regeneration process. In this study, we sought to screen out the novel genes which act important roles in diabetic fibroblasts through bioinformatic methods. A total of 811 and 490 differentially expressed genes (DEGs) between diabetic and normal fibroblasts were screened out in GSE49566 and GSE78891, respectively. Furthermore, the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways involved in type 2 diabetes were retrieved from miRWalk. Consequently, the integrated bioinformatic analyses revealed the shared KEGG pathways between DEG-identified and diabetes-related pathways were functionally enriched in the MAPK signaling pathway, and the MAPKAPK3, HSPA2, TGFBR1, and p53 signaling pathways were involved. Finally, ETV4 and NPE2 were identified as the targeted transcript factors of MAPKAPK3, HSPA2, and TGFBR1. Our findings may throw novel sight in elucidating the molecular mechanisms of fibroblast pathologies in patients with diabetic wounds and targeting new factors to advance diabetic wound treatment in clinic. Hindawi 2021-12-07 /pmc/articles/PMC8670931/ /pubmed/34917686 http://dx.doi.org/10.1155/2021/7619610 Text en Copyright © 2021 Weirong Zhu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhu, Weirong
Fang, Qin
Liu, Zhao
Chen, Qiming
Novel Genes Potentially Involved in Fibroblasts of Diabetic Wound
title Novel Genes Potentially Involved in Fibroblasts of Diabetic Wound
title_full Novel Genes Potentially Involved in Fibroblasts of Diabetic Wound
title_fullStr Novel Genes Potentially Involved in Fibroblasts of Diabetic Wound
title_full_unstemmed Novel Genes Potentially Involved in Fibroblasts of Diabetic Wound
title_short Novel Genes Potentially Involved in Fibroblasts of Diabetic Wound
title_sort novel genes potentially involved in fibroblasts of diabetic wound
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8670931/
https://www.ncbi.nlm.nih.gov/pubmed/34917686
http://dx.doi.org/10.1155/2021/7619610
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