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Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks

To be able to predict reversed phase liquid chromatographic (RPLC) retention times of contaminants is an asset in order to solve food contamination issues. The development of quantitative structure–retention relationship models (QSRR) requires selection of the best molecular descriptors and machine-...

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Autor principal: Parinet, Julien
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8671870/
https://www.ncbi.nlm.nih.gov/pubmed/34950792
http://dx.doi.org/10.1016/j.heliyon.2021.e08563
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author Parinet, Julien
author_facet Parinet, Julien
author_sort Parinet, Julien
collection PubMed
description To be able to predict reversed phase liquid chromatographic (RPLC) retention times of contaminants is an asset in order to solve food contamination issues. The development of quantitative structure–retention relationship models (QSRR) requires selection of the best molecular descriptors and machine-learning algorithms. In the present work, two main approaches have been tested and compared, one based on an extensive literature review to select the best set of molecular descriptors (16), and a second with diverse strategies in order to select among 1545 molecular descriptors (MD), 16 MD. In both cases, a deep neural network (DNN) were optimized through a gridsearch.
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spelling pubmed-86718702021-12-22 Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks Parinet, Julien Heliyon Research Article To be able to predict reversed phase liquid chromatographic (RPLC) retention times of contaminants is an asset in order to solve food contamination issues. The development of quantitative structure–retention relationship models (QSRR) requires selection of the best molecular descriptors and machine-learning algorithms. In the present work, two main approaches have been tested and compared, one based on an extensive literature review to select the best set of molecular descriptors (16), and a second with diverse strategies in order to select among 1545 molecular descriptors (MD), 16 MD. In both cases, a deep neural network (DNN) were optimized through a gridsearch. Elsevier 2021-12-07 /pmc/articles/PMC8671870/ /pubmed/34950792 http://dx.doi.org/10.1016/j.heliyon.2021.e08563 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Parinet, Julien
Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks
title Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks
title_full Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks
title_fullStr Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks
title_full_unstemmed Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks
title_short Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks
title_sort predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8671870/
https://www.ncbi.nlm.nih.gov/pubmed/34950792
http://dx.doi.org/10.1016/j.heliyon.2021.e08563
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