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Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks
To be able to predict reversed phase liquid chromatographic (RPLC) retention times of contaminants is an asset in order to solve food contamination issues. The development of quantitative structure–retention relationship models (QSRR) requires selection of the best molecular descriptors and machine-...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8671870/ https://www.ncbi.nlm.nih.gov/pubmed/34950792 http://dx.doi.org/10.1016/j.heliyon.2021.e08563 |
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author | Parinet, Julien |
author_facet | Parinet, Julien |
author_sort | Parinet, Julien |
collection | PubMed |
description | To be able to predict reversed phase liquid chromatographic (RPLC) retention times of contaminants is an asset in order to solve food contamination issues. The development of quantitative structure–retention relationship models (QSRR) requires selection of the best molecular descriptors and machine-learning algorithms. In the present work, two main approaches have been tested and compared, one based on an extensive literature review to select the best set of molecular descriptors (16), and a second with diverse strategies in order to select among 1545 molecular descriptors (MD), 16 MD. In both cases, a deep neural network (DNN) were optimized through a gridsearch. |
format | Online Article Text |
id | pubmed-8671870 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-86718702021-12-22 Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks Parinet, Julien Heliyon Research Article To be able to predict reversed phase liquid chromatographic (RPLC) retention times of contaminants is an asset in order to solve food contamination issues. The development of quantitative structure–retention relationship models (QSRR) requires selection of the best molecular descriptors and machine-learning algorithms. In the present work, two main approaches have been tested and compared, one based on an extensive literature review to select the best set of molecular descriptors (16), and a second with diverse strategies in order to select among 1545 molecular descriptors (MD), 16 MD. In both cases, a deep neural network (DNN) were optimized through a gridsearch. Elsevier 2021-12-07 /pmc/articles/PMC8671870/ /pubmed/34950792 http://dx.doi.org/10.1016/j.heliyon.2021.e08563 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Parinet, Julien Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks |
title | Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks |
title_full | Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks |
title_fullStr | Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks |
title_full_unstemmed | Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks |
title_short | Predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks |
title_sort | predicting reversed-phase liquid chromatographic retention times of pesticides by deep neural networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8671870/ https://www.ncbi.nlm.nih.gov/pubmed/34950792 http://dx.doi.org/10.1016/j.heliyon.2021.e08563 |
work_keys_str_mv | AT parinetjulien predictingreversedphaseliquidchromatographicretentiontimesofpesticidesbydeepneuralnetworks |