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Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling
Characterizing the molecular signature of a cell subtype leads to a better understanding of cell diversity, as this molecular data can identify new cellular markers and offer insights about cell function. Here, we describe an efficient protocol to separate a subtype of astrocytes, the Olig2-AS, from...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672091/ https://www.ncbi.nlm.nih.gov/pubmed/34950888 http://dx.doi.org/10.1016/j.xpro.2021.101009 |
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author | Aguirrebengoa, Marion Ohayon, David |
author_facet | Aguirrebengoa, Marion Ohayon, David |
author_sort | Aguirrebengoa, Marion |
collection | PubMed |
description | Characterizing the molecular signature of a cell subtype leads to a better understanding of cell diversity, as this molecular data can identify new cellular markers and offer insights about cell function. Here, we describe an efficient protocol to separate a subtype of astrocytes, the Olig2-AS, from other glial cells by using a double reporter mouse approach and to determine the transcriptome profile of the Olig2-AS from the postnatal spinal cord using RNA-sequencing analysis. For complete details on the use and execution of this protocol, please refer to Ohayon et al. (2021). |
format | Online Article Text |
id | pubmed-8672091 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-86720912021-12-22 Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling Aguirrebengoa, Marion Ohayon, David STAR Protoc Protocol Characterizing the molecular signature of a cell subtype leads to a better understanding of cell diversity, as this molecular data can identify new cellular markers and offer insights about cell function. Here, we describe an efficient protocol to separate a subtype of astrocytes, the Olig2-AS, from other glial cells by using a double reporter mouse approach and to determine the transcriptome profile of the Olig2-AS from the postnatal spinal cord using RNA-sequencing analysis. For complete details on the use and execution of this protocol, please refer to Ohayon et al. (2021). Elsevier 2021-12-10 /pmc/articles/PMC8672091/ /pubmed/34950888 http://dx.doi.org/10.1016/j.xpro.2021.101009 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Protocol Aguirrebengoa, Marion Ohayon, David Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling |
title | Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling |
title_full | Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling |
title_fullStr | Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling |
title_full_unstemmed | Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling |
title_short | Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling |
title_sort | purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling |
topic | Protocol |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672091/ https://www.ncbi.nlm.nih.gov/pubmed/34950888 http://dx.doi.org/10.1016/j.xpro.2021.101009 |
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