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Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling

Characterizing the molecular signature of a cell subtype leads to a better understanding of cell diversity, as this molecular data can identify new cellular markers and offer insights about cell function. Here, we describe an efficient protocol to separate a subtype of astrocytes, the Olig2-AS, from...

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Detalles Bibliográficos
Autores principales: Aguirrebengoa, Marion, Ohayon, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672091/
https://www.ncbi.nlm.nih.gov/pubmed/34950888
http://dx.doi.org/10.1016/j.xpro.2021.101009
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author Aguirrebengoa, Marion
Ohayon, David
author_facet Aguirrebengoa, Marion
Ohayon, David
author_sort Aguirrebengoa, Marion
collection PubMed
description Characterizing the molecular signature of a cell subtype leads to a better understanding of cell diversity, as this molecular data can identify new cellular markers and offer insights about cell function. Here, we describe an efficient protocol to separate a subtype of astrocytes, the Olig2-AS, from other glial cells by using a double reporter mouse approach and to determine the transcriptome profile of the Olig2-AS from the postnatal spinal cord using RNA-sequencing analysis. For complete details on the use and execution of this protocol, please refer to Ohayon et al. (2021).
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spelling pubmed-86720912021-12-22 Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling Aguirrebengoa, Marion Ohayon, David STAR Protoc Protocol Characterizing the molecular signature of a cell subtype leads to a better understanding of cell diversity, as this molecular data can identify new cellular markers and offer insights about cell function. Here, we describe an efficient protocol to separate a subtype of astrocytes, the Olig2-AS, from other glial cells by using a double reporter mouse approach and to determine the transcriptome profile of the Olig2-AS from the postnatal spinal cord using RNA-sequencing analysis. For complete details on the use and execution of this protocol, please refer to Ohayon et al. (2021). Elsevier 2021-12-10 /pmc/articles/PMC8672091/ /pubmed/34950888 http://dx.doi.org/10.1016/j.xpro.2021.101009 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Protocol
Aguirrebengoa, Marion
Ohayon, David
Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling
title Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling
title_full Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling
title_fullStr Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling
title_full_unstemmed Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling
title_short Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling
title_sort purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling
topic Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672091/
https://www.ncbi.nlm.nih.gov/pubmed/34950888
http://dx.doi.org/10.1016/j.xpro.2021.101009
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